RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 KITP10721 976 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 NCF2P19878 526 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 HSPA14Q0VDF9 509 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 TMEM196Q5HYL7 178 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 PACS1Q6VY07 963 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 PARS2Q7L3T8 475 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 HID1Q8IV36 788 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 LMNTD2Q8IXW0 634 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 TAS2R1Q9NYW7 299 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 FBXO5Q9UKT4 447 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 OR51F1A6NGY5 319 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZNF195O14628 629 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 GSC2O15499 205 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 SERPINE1P05121 402 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 HIST1H2AGP0C0S8 130 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 HIST1H2ADP20671 130 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 ETV3P41162 512 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 TTPAP49638 278 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 DNAL1Q4LDG9 190 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 TSPAN33Q86UF1 283 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 ETFBKMTQ8IXQ9 262 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 CCDC126Q96EE4 140 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 HIST1H2AHQ96KK5 128 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 SMIM14Q96QK8 99 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 HIST1H2AJQ99878 128 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 H2AFJQ9BTM1 129 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 ACOT9Q9Y305 439 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 OR2AG2A6NM03 316 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 MTX2O75431 263 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZMPSTE24O75844 475 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 RPS21P63220 83 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 TEAD4Q15561 434 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 TSSK4Q6SA08 328 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 PGBD5Q8N414 524 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 DCLK2Q8N568 766 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 KIAA1958Q8N8K9 716 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 PTCD2Q8WV60 388 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 CCDC106Q9BWC9 280 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 UNKQ9C0B0 810 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 WDR26Q9H7D7 661 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 KCNK4Q9NYG8 393 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 GMEB2Q9UKD1 530 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 CABIN1Q9Y6J0 2220 aa12.35□□□□□ -0.43
SYNGAP1-207ENST00000628646 ENTPD5O75356 428 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 CISD3P0C7P0 127 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 MESP2Q0VG99 397 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 PCLAFQ15004 111 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 FAM83EQ2M2I3 478 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 PLA2G4EQ3MJ16 856 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 C5orf22Q49AR2 442 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 N4BP2L1Q5TBK1 243 aaPredicted RBP12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 TMEM215Q68D42 235 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 BTBD10Q9BSF8 475 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZCWPW2A0A1B0GU75 182 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 TSPAN6O43657 245 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ITM2AO43736 263 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 DIAPH2O60879 1101 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 RASGRP1O95267 797 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 STMN1P16949 149 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZNF30P17039 623 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 SIGLEC14Q08ET2 396 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 WDR45BQ5MNZ6 344 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZDHHC20Q5W0Z9 365 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 UGT3A1Q6NUS8 523 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 LPCAT2Q7L5N7 544 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 PHYKPLQ8IUZ5 450 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 SORT1Q99523 831 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 SERPINI1Q99574 410 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 EML4Q9HC35 981 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 SCML1Q9UN30 329 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 NUMA1Q14980 2115 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 SLCO1B7G3V0H7 640 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 FCHO1O14526 889 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 GOT2P00505 430 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 CALB2P22676 271 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ITGB7P26010 798 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 CRABP2P29373 138 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 OXTRP30559 389 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 CREB5Q02930 508 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 WASHC2DQ5SRD0 308 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 FAM217AQ8IXS0 508 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZNF683Q8IZ20 524 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ELMO1Q92556 727 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 VCX3BQ9H321 246 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 IFRD1O00458 451 aaPredicted RBP12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 RPS6KA2Q15349 733 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 CHRNA6Q15825 494 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 KHDC1Q4VXA5 237 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 TEDDM1Q5T9Z0 273 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 AGAP9Q5VTM2 703 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ENPP7Q6UWV6 458 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 TMEM135Q86UB9 458 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 TMEFF1Q8IYR6 380 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ARRDC2Q8TBH0 407 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 NDNQ99608 321 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 GTPBP2Q9BX10 602 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 MKRN2Q9H000 416 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ILKAPQ9H0C8 392 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms