RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 LGR4Q9BXB1 951 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 TEX101Q9BY14 249 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 GSDMCQ9BYG8 508 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 GPR63Q9BZJ6 419 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 CLPBQ9H078 707 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 CDH19Q9H159 772 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 DPEP2Q9H4A9 486 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 FAM83DQ9H4H8 585 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 CAAP1Q9H8G2 361 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 ZFYVE1Q9HBF4 777 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 GLOD4Q9HC38 313 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 FGF22Q9HCT0 170 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 MRPL40Q9NQ50 206 aaKnown RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 TRHDEQ9UKU6 1024 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 AMFRQ9UKV5 643 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 PNMA8BQ9ULN7 279 aaPredicted RBP6.36□□□□□ -1.39
TCF4-249ENST00000625716 DUSP10Q9Y6W6 482 aa6.36□□□□□ -1.39
TCF4-249ENST00000625716 CNOT1A5YKK6 2376 aaKnown RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 A0A0U1RQS6 177 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 MIF4GDA9UHW6 222 aaKnown RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 B4DGG1 531 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 APOC4-APOC2K7ER74 178 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 INPP4BO15327 924 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 ICMTO60725 284 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 CSO75390 466 aaKnown RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 TCEA3O75764 348 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 NDST3O95803 873 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 MT-CYBP00156 380 aaPredicted RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 PRLP01236 227 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 APOC2P02655 101 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 SLC4A1P02730 911 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 CEACAM5P06731 702 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 MMP2P08253 660 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 FOSL1P15407 271 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 PECAM1P16284 738 aaPredicted RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 ACTN2P35609 894 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 GNPDA1P46926 289 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 MARCKSL1P49006 195 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 PPM1FP49593 454 aaPredicted RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 STC1P52823 247 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 XRCC4Q13426 336 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 SPIDRQ14159 915 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 PRPSAP1Q14558 356 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 PRKD1Q15139 912 aaPredicted RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 SLC14A2Q15849 920 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 TAZQ16635 292 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 ITPRIPL1Q6GPH6 555 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 DARS2Q6PI48 645 aaKnown RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 RBM44Q6ZP01 1051 aaKnown RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 BBS12Q6ZW61 710 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 MARK2Q7KZI7 788 aaKnown RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 PROSER1Q86XN7 944 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 GALNT13Q8IUC8 556 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 CDKL3Q8IVW4 592 aaPredicted RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 SLC35F3Q8IY50 421 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 DCBLD1Q8N8Z6 715 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 KYQ8NBH2 561 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 SPATA22Q8NHS9 363 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 KRT35Q92764 455 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 SCAMP4Q969E2 229 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 GRAMD1AQ96CP6 724 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 QKIQ96PU8 341 aaKnown RBP eCLIP6.35□□□□□ -1.39
TCF4-249ENST00000625716 SMIM14Q96QK8 99 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 LYSMD1Q96S90 227 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 CCDC3Q9BQI4 270 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 TRIM56Q9BRZ2 755 aaKnown RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 SPATA16Q9BXB7 569 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 FSD1LQ9BXM9 530 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 OSBPL8Q9BZF1 889 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 TSGA10Q9BZW7 698 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 TMEM168Q9H0V1 697 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 CLEC4MQ9H2X3 399 aaPredicted RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 LIN7BQ9HAP6 207 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 MAGEE1Q9HCI5 957 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 TRNAU1APQ9NX07 287 aaKnown RBP6.35□□□□□ -1.39
TCF4-249ENST00000625716 UBP1Q9NZI7 540 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 FAM153AQ9UHL3 310 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 RSPH14Q9UHP6 348 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 ZNHIT2Q9UHR6 403 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 SUFUQ9UMX1 484 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 SHOC2Q9UQ13 582 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 SLC17A4Q9Y2C5 497 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 EFR3BQ9Y2G0 817 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 TMEM98Q9Y2Y6 226 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 PCNX2A6NKB5 2137 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 SPTBN2O15020 2390 aa6.35□□□□□ -1.39
TCF4-249ENST00000625716 LY6G6EA0A0G2JKS1 128 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 GRID2IPA4D2P6 1211 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 SRRM3A6NNA2 597 aaPredicted RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 RHPN2P1A8MT19 583 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 F5H423 210 aaPredicted RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 TMX2-CTNND1H3BSU7 103 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 RRP8O43159 456 aaKnown RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 KRT86O43790 486 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 USP12O75317 370 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 KRT37O76014 449 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 ANXA9O76027 345 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 IVLP07476 585 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 PIRTP0C851 137 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 RBL1P28749 1068 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms