RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 RAD18Q9NS91 495 aa18.68■□□□□ 0.58
SMN1-211ENST00000625245 UVRAGQ9P2Y5 699 aa18.68■□□□□ 0.58
SMN1-211ENST00000625245 TRIM10Q9UDY6 481 aa18.68■□□□□ 0.58
SMN1-211ENST00000625245 CROTQ9UKG9 612 aa18.68■□□□□ 0.58
SMN1-211ENST00000625245 FLNCQ14315 2725 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 PRR19A6NJB7 356 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 CHUKO15111 745 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 KIAA0754O94854 1291 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 H2AFZP0C0S5 128 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 RPL10P27635 214 aaKnown RBP18.67■□□□□ 0.58
SMN1-211ENST00000625245 CRTC2Q53ET0 693 aaPredicted RBP18.67■□□□□ 0.58
SMN1-211ENST00000625245 H2AFVQ71UI9 128 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 TMC3Q7Z5M5 1100 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 NT5DC3Q86UY8 548 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.67■□□□□ 0.58
SMN1-211ENST00000625245 CTNNBL1Q8WYA6 563 aaPredicted RBP18.67■□□□□ 0.58
SMN1-211ENST00000625245 TRIB3Q96RU7 358 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 PACSIN1Q9BY11 444 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 MAGEE1Q9HCI5 957 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 TP53TG5Q9Y2B4 290 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 ZNF711Q9Y462 761 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 KCTD3Q9Y597 815 aa18.67■□□□□ 0.58
SMN1-211ENST00000625245 LRRD1A4D1F6 860 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 KIF1CO43896 1103 aaKnown RBP18.66■□□□□ 0.58
SMN1-211ENST00000625245 CDK14O94921 469 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 NDUFA10O95299 355 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 NR1D1P20393 614 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 DRG2P55039 364 aaKnown RBP18.66■□□□□ 0.58
SMN1-211ENST00000625245 DCDC1P59894 354 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 CDK18Q07002 472 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 MESDQ14696 234 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 CACHD1Q5VU97 1274 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 PDPK2PQ6A1A2 396 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 CCDC70Q6NSX1 233 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 IRGCQ6NXR0 463 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 FAM92BQ6ZTR7 304 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 B4GALNT4Q76KP1 1039 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 LUZP1Q86V48 1076 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 RSC1A1Q92681 617 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 CXorf40BQ96DE9 158 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 IMP4Q96G21 291 aaKnown RBP18.66■□□□□ 0.58
SMN1-211ENST00000625245 TIMM29Q9BSF4 260 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 MAK16Q9BXY0 300 aaKnown RBP18.66■□□□□ 0.58
SMN1-211ENST00000625245 BPIFA1Q9NP55 256 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 LNPEPQ9UIQ6 1025 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 PLAAQ9Y263 795 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 KCNMB2Q9Y691 235 aa18.66■□□□□ 0.58
SMN1-211ENST00000625245 OR52A4PA6NMU1 304 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 TOX3O15405 576 aaPredicted RBP18.65■□□□□ 0.58
SMN1-211ENST00000625245 CCNYL3P0C7X3 344 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 BPIP17213 487 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 IDSP22304 550 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 IL11RAQ14626 422 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 ABRAXAS1Q6UWZ7 409 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 PLD5Q8N7P1 536 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 GDAP1Q8TB36 358 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 IQCDQ96DY2 449 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 SLC25A51Q9H1U9 297 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 ZNF768Q9H5H4 540 aaKnown RBP18.65■□□□□ 0.58
SMN1-211ENST00000625245 CBX8Q9HC52 389 aa18.65■□□□□ 0.58
SMN1-211ENST00000625245 PIPSLA2A3N6 862 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 CDC14CA4D256 554 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 APOL1O14791 398 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 VEGFDO43915 354 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 PMPCBO75439 489 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 MT-CYBP00156 380 aaPredicted RBP18.64■□□□□ 0.57
SMN1-211ENST00000625245 FURINP09958 794 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 BRAFP15056 766 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 KLRB1Q12918 225 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 GPR18Q14330 331 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 KHDC1Q4VXA5 237 aaKnown RBP18.64■□□□□ 0.57
SMN1-211ENST00000625245 NPNTQ6UXI9 565 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 TRAPPC5Q8IUR0 188 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 ZNF547Q8IVP9 402 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 SPATA22Q8NHS9 363 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 ZDHHC12Q96GR4 267 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 SLC40A1Q9NP59 571 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 POT1Q9NUX5 634 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 NFKBIL1Q9UBC1 381 aaPredicted RBP18.64■□□□□ 0.57
SMN1-211ENST00000625245 LCMT1Q9UIC8 334 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 KCND3Q9UK17 655 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 NENFQ9UMX5 172 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 POLHQ9Y253 713 aa18.64■□□□□ 0.57
SMN1-211ENST00000625245 MKRN2OSH3BPM6 223 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 K7EM74 188 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 AURKAO14965 403 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 PPP1R12AO14974 1030 aaPredicted RBP18.63■□□□□ 0.57
SMN1-211ENST00000625245 SPAG6O75602 509 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 GYPCP04921 128 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 VCLP18206 1134 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 CASP14P31944 242 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 CAPZBP47756 277 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 GTF2H3Q13889 308 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 PDK1Q15118 436 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 PRSS42Q7Z5A4 293 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 TMEM135Q86UB9 458 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 RFX6Q8HWS3 928 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 TEX19Q8NA77 164 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 TTC25Q96NG3 672 aa18.63■□□□□ 0.57
SMN1-211ENST00000625245 TWSG1Q9GZX9 223 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms