RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 ACTRT1Q8TDG2 376 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 STYXQ8WUJ0 223 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZCCHC14Q8WYQ9 949 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 TIMM29Q9BSF4 260 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 TMEM121BQ9BXQ6 578 aaPredicted RBP13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 LRRN3Q9H3W5 708 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 FAM96AQ9H5X1 160 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCDC86Q9H6F5 360 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 NLE1Q9NVX2 485 aaPredicted RBP13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 TBC1D29Q9UFV1 150 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 PLXNB3Q9ULL4 1909 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 PDZK1P1A8MUH7 402 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 CFAP99D6REC4 459 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZNF185O15231 689 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 KRT14P02533 472 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 F3P13726 295 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 PBLDP30039 288 aaPredicted RBP13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 COILP38432 576 aaPredicted RBP13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 GPS1Q13098 491 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 SEPT7Q16181 437 aaKnown RBP13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 ST3GAL2Q16842 350 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 KCTD19Q17RG1 926 aaPredicted RBP13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 ISXQ2M1V0 245 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 MAP9Q49MG5 647 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 FNBP1LQ5T0N5 605 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 TTC27Q6P3X3 843 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 TMEM220Q6QAJ8 160 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 SPRED1Q7Z699 444 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 SLC9B2Q86UD5 537 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 PPHLN1Q8NEY8 458 aaKnown RBP13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 SLC37A2Q8TED4 501 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 COPS8Q99627 209 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 NAPGQ99747 312 aaPredicted RBP13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 C19orf43Q9BQ61 176 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 CASS4Q9NQ75 786 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 PRDM8Q9NQV8 689 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 EIF2B3Q9NR50 452 aaKnown RBP13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 PCDHB1Q9Y5F3 818 aa13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.77□□□□□ -0.21
PCDHGC3-208ENST00000622836 MAP1BP46821 2468 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZFC3H1O60293 1989 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 A0A1W2PQM1 296 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 CTAGE9A4FU28 777 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 MROH6A6NGR9 719 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 OR5K4A6NMS3 321 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 AP3B1O00203 1094 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 CES2O00748 559 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 CASC3O15234 703 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 PHF2O75151 1096 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 EML2O95834 649 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 IDSP22304 550 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 ADRA1DP25100 572 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 CA5AP35218 305 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 SESN2P58004 480 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 OR1D5P58170 312 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 SARNPP82979 210 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 XIAPP98170 497 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 HHEXQ03014 270 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 CYP4F3Q08477 520 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 CAMK2BQ13554 666 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 GPR33Q49SQ1 333 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 IYDQ6PHW0 289 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 AMZ2Q86W34 360 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 C17orf82Q86X59 251 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZNF547Q8IVP9 402 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 TRIM48Q8IWZ4 208 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 NXPE1Q8N323 547 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 SFRP1Q8N474 314 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 MDM1Q8TC05 714 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 GRK7Q8WTQ7 553 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 HEXDCQ8WVB3 486 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 SGF29Q96ES7 293 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 AHCYL2Q96HN2 611 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 CDKN2AIPNLQ96HQ2 116 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZNF514Q96K75 400 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 CAPZA3Q96KX2 299 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 SLC38A3Q99624 504 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 NRSN2Q9GZP1 204 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 KCNK4Q9NYG8 393 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 SLC23A2Q9UGH3 650 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 ATXN7L1Q9ULK2 861 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 MYLKQ15746 1914 aa13.76□□□□□ -0.21
PCDHGC3-208ENST00000622836 KIR2DS5A0A0G2JLQ3 304 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 A0A0G2JNG1 304 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 D6RAR5 112 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 KIR2DS3K7RE56 304 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 NTN3O00634 580 aaPredicted RBP13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 PPM1DO15297 605 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 POP7O75817 140 aaKnown RBP13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 RPL10P27635 214 aaKnown RBP13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 HALP42357 657 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 GPR3P46089 330 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 FASLGP48023 281 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 CLCNKAP51800 687 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 CTSCP53634 463 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 DRG2P55039 364 aaKnown RBP13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 CACNG1Q06432 222 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 KIR2DS5Q14953 304 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 PPP1R7Q15435 360 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 CYP1B1Q16678 543 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms