RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 NR3C2P08235 984 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 HTR1AP08908 422 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 HDCP19113 662 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 TRIM23P36406 574 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 UGT2B10P36537 528 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 HNF4AP41235 474 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 EMX1Q04741 257 aaPredicted RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 PIGHQ14442 188 aaPredicted RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 ACOX1Q15067 660 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 LRRC26Q2I0M4 334 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ALFQ53S48 1182 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 C1orf220Q5T0J3 134 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 SWSAP1Q6NVH7 229 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 FAM171BQ6P995 826 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ENOSF1Q7L5Y1 443 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 SP8Q8IXZ3 490 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ZNF565Q8N9K5 539 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 OR10T2Q8NGX3 314 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ST8SIA2Q92186 375 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 TMCO6Q96DC7 493 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 MYRFLQ96LU7 910 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 IL1RL2Q9HB29 575 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 C1orf112Q9NSG2 853 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 HSPBP1Q9NZL4 362 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 RAPGEFL1Q9UHV5 662 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 MID2Q9UJV3 735 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 OSGIN1Q9UJX0 560 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ANAPC2Q9UJX6 822 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 TMEM5Q9Y2B1 443 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 STON1Q9Y6Q2 735 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 RAB19A4D1S5 217 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 TMEM191CA6NGB0 347 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 PRSS44E7EML9 344 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 NRP2O60462 931 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 SMPD2O60906 423 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 TNFRSF21O75509 655 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 GDF11O95390 407 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 MT-ND1P03886 318 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 HMGN1P05114 100 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ATXN8OSP0DMR3 200 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 OXTRP30559 389 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 GGT5P36269 586 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 GMPRP36959 345 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 MAGEA11P43364 429 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 CPT1AP50416 773 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 SLAMF1Q13291 335 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 PPA1Q15181 289 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 HADHQ16836 314 aaKnown RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 ARL13AQ5H913 290 aaPredicted RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 CACHD1Q5VU97 1274 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 CDC42EP5Q6NZY7 148 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 BRAT1Q6PJG6 821 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 NECAB2Q7Z6G3 386 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 OR8H3Q8N146 312 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 TMEM199Q8N511 208 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 KCTD6Q8NC69 237 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 OR7D4Q8NG98 312 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 NCLNQ969V3 563 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 OPALINQ96PE5 141 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ZNF300Q96RE9 604 aaPredicted RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 SLC25A23Q9BV35 468 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 CRLF2Q9HC73 371 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 C14orf119Q9NWQ9 140 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ZIM2Q9NZV7 527 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 SEPT9Q9UHD8 586 aaPredicted RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 SARDHQ9UL12 918 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 PCDHA11Q9Y5I1 949 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 CYP3A7-CYP3A51PA0A087WV96 503 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 LOC110117498-PIK3R3F6TDL0 507 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 AKR7A2O43488 359 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 APBB3O95704 486 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 PRKCGP05129 697 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 PROS1P07225 676 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ZNF3P17036 446 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 CYP3A5P20815 502 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 CYP3A7P24462 503 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 SHMT1P34896 483 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 CCT3P49368 545 aaKnown RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 AKR1D1P51857 326 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 NKX3-2P78367 333 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 PRKCDQ05655 676 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 BTN1A1Q13410 526 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 MFSD10Q14728 455 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 SMAD1Q15797 465 aaKnown RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 C1orf186Q6ZWK4 172 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 STK32CQ86UX6 486 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 FAM83AQ86UY5 434 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 FBXO11Q86XK2 927 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ADGRF4Q8IZF3 695 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 CHDHQ8NE62 594 aaPredicted RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 OR6P1Q8NGX9 317 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 NEDD4LQ96PU5 975 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 LXNQ9BS40 222 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 PI4K2AQ9BTU6 479 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 COA1Q9GZY4 146 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 SLC6A17Q9H1V8 727 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 IFT46Q9NQC8 304 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ZNF624Q9P2J8 865 aaPredicted RBP7.85□□□□□ -1.15
VPS11-209ENST00000622309 SLC17A6Q9P2U8 582 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 ENOPH1Q9UHY7 261 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms