RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ALDH7A1P49419 539 aaKnown RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 NME5P56597 212 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 ERVK-8P63133 956 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 ECT2LQ008S8 904 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 PCBP2Q15366 365 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDPN-212ENST00000621990 TGFBIQ15582 683 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 MAP7D1Q3KQU3 841 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 PITRM1Q5JRX3 1037 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 PPP4R4Q6NUP7 873 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 CERS6Q6ZMG9 384 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 GPRIN3Q6ZVF9 776 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 TMEM150AQ86TG1 271 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 FAM217AQ8IXS0 508 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 PACRGLQ8N7B6 248 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 OR2T11Q8NH01 316 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 CANT1Q8WVQ1 401 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 TMEM125Q96AQ2 219 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 IGSF21Q96ID5 467 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 SLC45A3Q96JT2 553 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 TEX37Q96LM6 180 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 RBM38Q9H0Z9 239 aaKnown RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 SEMA6AQ9H2E6 1030 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 AGPAT4Q9NRZ5 378 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 ZIM2Q9NZV7 527 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 DHRS7Q9Y394 339 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 ZNF711Q9Y462 761 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 YIPF1Q9Y548 306 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 ASB1Q9Y576 335 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 TIMM22Q9Y584 194 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 PCDHB1Q9Y5F3 818 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 TYW5A2RUC4 315 aaKnown RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 KIF3CO14782 793 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 HNRNPRO43390 633 aaKnown RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 TSPAN3O60637 253 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 AOC2O75106 756 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 CRCPO75575 148 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 CSPG5O95196 566 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 STAMBPO95630 424 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 NPPAP01160 153 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 RPS3P23396 243 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDPN-212ENST00000621990 GRIA3P42263 894 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 POLE2P56282 527 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 YBX1P67809 324 aaKnown RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 PTPRRQ15256 657 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 ZRANB3Q5FWF4 1079 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 NHSL2Q5HYW2 709 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 INTS11Q5TA45 600 aaKnown RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 LINGO4Q6UY18 593 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 C16orf59Q7L2K0 433 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 CPNE9Q8IYJ1 553 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 METTL25Q8N6Q8 603 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 SLAIN1Q8ND83 568 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 ANKRD60Q9BZ19 345 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 NOL11Q9H8H0 719 aaKnown RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 HEBP1Q9NRV9 189 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 RNF11Q9Y3C5 154 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 DHRS12A0PJE2 317 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 EME2A4GXA9 379 aaPredicted RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 ZNF839A8K0R7 811 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 GAPDHSO14556 408 aaPredicted RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 SNX2O60749 519 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 SLC22A3O75751 556 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 PGM3O95394 542 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 OLFM2O95897 454 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 PSMC3P17980 439 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 MZF1P28698 734 aaPredicted RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 AP1S1P61966 158 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 RPS6KA2Q15349 733 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 NRF1Q16656 503 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 SBSNQ6UWP8 590 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 Q6ZNB5 142 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 TMEM199Q8N511 208 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 EFHBQ8N7U6 833 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 MFSD2AQ8NA29 543 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 DCAF4L2Q8NA75 395 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 ADAMTS19Q8TE59 1207 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 PIH1D2Q8WWB5 315 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 DGCR14Q96DF8 476 aaKnown RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 SLC29A1Q99808 456 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 BPIFA1Q9NP55 256 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 RIC8BQ9NVN3 520 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 EIF2B4Q9UI10 523 aaKnown RBP9.33□□□□□ -0.92
PDPN-212ENST00000621990 PKP3Q9Y446 797 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 DYTNA2CJ06 578 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 FAM234BA2RU67 622 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 NCF1BA6NI72 391 aaPredicted RBP9.32□□□□□ -0.92
PDPN-212ENST00000621990 NCF1CA8MVU1 366 aaPredicted RBP9.32□□□□□ -0.92
PDPN-212ENST00000621990 PRMT5O14744 637 aaPredicted RBP9.32□□□□□ -0.92
PDPN-212ENST00000621990 ARPC2O15144 300 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 PGLSO95336 258 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 PRAMEF12O95522 483 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 SOD2P04179 222 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 GPIP06744 558 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 NCF1P14598 390 aaPredicted RBP9.32□□□□□ -0.92
PDPN-212ENST00000621990 CHRM3P20309 590 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 SH3BGRP55822 239 aaPredicted RBP9.32□□□□□ -0.92
PDPN-212ENST00000621990 KCNK10P57789 538 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 ERVPABLB-1P60509 514 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 LSAMPQ13449 338 aa9.32□□□□□ -0.92
PDPN-212ENST00000621990 CAPRIN1Q14444 709 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms