RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ZNF284Q2VY69 593 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 GPRC6AQ5T6X5 926 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 EBF4Q9BQW3 602 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 RIOK2Q9BVS4 552 aaKnown RBP21.21■□□□□ 0.99
SPAST-204ENST00000621856 PRSS16Q9NQE7 514 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 NFKBIL1Q9UBC1 381 aaPredicted RBP21.21■□□□□ 0.99
SPAST-204ENST00000621856 CD207Q9UJ71 328 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 STON1Q9Y6Q2 735 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 WASP42768 502 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 RGS4P49798 205 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 HK2P52789 917 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 ACTN3Q08043 901 aaPredicted RBP21.21■□□□□ 0.99
SPAST-204ENST00000621856 MAVSQ7Z434 540 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 CLNKQ7Z7G1 428 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 TRAM1L1Q8N609 369 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 ZBTB2Q8N680 514 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 L3HYPDHQ96EM0 354 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 DCUN1D1Q96GG9 259 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 EML4Q9HC35 981 aaKnown RBP21.21■□□□□ 0.99
SPAST-204ENST00000621856 FBRSL1Q9HCM7 1045 aaKnown RBP21.21■□□□□ 0.99
SPAST-204ENST00000621856 SMOXQ9NWM0 555 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 TMPRSS11EQ9UL52 423 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.21■□□□□ 0.99
SPAST-204ENST00000621856 C5orf42Q9H799 3197 aa21.2■□□□□ 0.99
SPAST-204ENST00000621856 PIKFYVEQ9Y2I7 2098 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 IGLV3-16A0A075B6K0 115 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 PSMD11O00231 422 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 PLK4O00444 970 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 FCHO1O14526 889 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 DIAPH2O60879 1101 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 LIG3P49916 1009 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 IDH3AP50213 366 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 GALK1P51570 392 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 HERVK_113P63132 956 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 B4GALNT1Q00973 533 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 PFKFB4Q16877 469 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 ZNF678Q5SXM1 525 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 TECPR1Q7Z6L1 1165 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 CHPFQ8IZ52 775 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 FBXO39Q8N4B4 442 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 FUBP1Q96AE4 644 aaKnown RBP21.2■□□□□ 0.98
SPAST-204ENST00000621856 PANX3Q96QZ0 392 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 P2RY13Q9BPV8 354 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 ZSCAN5AQ9BUG6 496 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 ERVK-6Q9BXR3 956 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 SPATS2LQ9NUQ6 558 aaKnown RBP21.2■□□□□ 0.98
SPAST-204ENST00000621856 ZDHHC2Q9UIJ5 367 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 HAO1Q9UJM8 370 aa21.2■□□□□ 0.98
SPAST-204ENST00000621856 APOBEC2Q9Y235 224 aaKnown RBP21.2■□□□□ 0.98
SPAST-204ENST00000621856 CCDC189A1A4V9 331 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 ANHXE9PGG2 379 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 NEMP1O14524 444 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 SUPT7LO94864 414 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 OR56A5P0C7T3 313 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 ADRB3P13945 408 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 MTHFD2P13995 350 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 HNRNPLP14866 589 aaKnown RBP eCLIP21.19■□□□□ 0.98
SPAST-204ENST00000621856 DGKAP23743 735 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 COL19A1Q14993 1142 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 E2F5Q15329 346 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 HENMT1Q5T8I9 393 aaKnown RBP21.19■□□□□ 0.98
SPAST-204ENST00000621856 VWA5B1Q5TIE3 1220 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 FRMD7Q6ZUT3 714 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 GPSM1Q86YR5 675 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 NRSN1Q8IZ57 195 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 MYO1HQ8N1T3 1032 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 DTX3LQ8TDB6 740 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 PDLIM5Q96HC4 596 aaKnown RBP21.19■□□□□ 0.98
SPAST-204ENST00000621856 COG4Q9H9E3 785 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 TXLNGQ9NUQ3 528 aa21.19■□□□□ 0.98
SPAST-204ENST00000621856 CFAP99D6REC4 459 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 SLCO1B7G3V0H7 640 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 H0Y858 1186 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 ZNF195O14628 629 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 WNT9AO14904 365 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 SPINT1O43278 529 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 CCDC22O60826 627 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 SEC13P55735 322 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 AAK1Q2M2I8 961 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 TTLL9Q3SXZ7 439 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 UNC50Q53HI1 259 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 SPDYAQ5MJ70 313 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 FAM46CQ5VWP2 391 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 SEL1L3Q68CR1 1132 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 RPS27LQ71UM5 84 aaKnown RBP21.18■□□□□ 0.98
SPAST-204ENST00000621856 ERN2Q76MJ5 926 aaKnown RBP21.18■□□□□ 0.98
SPAST-204ENST00000621856 DET1Q7L5Y6 550 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 ZNF513Q8N8E2 541 aaPredicted RBP21.18■□□□□ 0.98
SPAST-204ENST00000621856 AP2M1Q96CW1 435 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 NMUR2Q9GZQ4 415 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 GSTO2Q9H4Y5 243 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 VTI1BQ9UEU0 232 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 H3BQ06 376 aaPredicted RBP21.18■□□□□ 0.98
SPAST-204ENST00000621856 HDAC3O15379 428 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 MAGEC1O60732 1142 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 TNFRSF4P43489 277 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 ALDH18A1P54886 795 aaKnown RBP21.18■□□□□ 0.98
SPAST-204ENST00000621856 SH2D4BQ5SQS7 431 aa21.18■□□□□ 0.98
SPAST-204ENST00000621856 SUGP1Q8IWZ8 645 aaKnown RBP21.18■□□□□ 0.98
SPAST-204ENST00000621856 PRR11Q96HE9 360 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms