RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 CYLC1P35663 651 aaPredicted RBP23.66■■□□□ 1.38
ATXN3-253ENST00000621269 UBE2IP63279 158 aaKnown RBP23.66■■□□□ 1.38
ATXN3-253ENST00000621269 NOMO1Q15155 1222 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 ATP13A5Q4VNC0 1218 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 ANKS6Q68DC2 871 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 XKR5Q6UX68 686 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 DAAM2Q86T65 1068 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 PLXDC1Q8IUK5 500 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 ZNF567Q8N184 647 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 EXTL1Q92935 676 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 TTC25Q96NG3 672 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 QKIQ96PU8 341 aaKnown RBP eCLIP23.66■■□□□ 1.38
ATXN3-253ENST00000621269 UCK1Q9HA47 277 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.66■■□□□ 1.38
ATXN3-253ENST00000621269 HACD3Q9P035 362 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 KLHL3Q9UH77 587 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 TRHDEQ9UKU6 1024 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 TFR2Q9UP52 801 aa23.66■■□□□ 1.38
ATXN3-253ENST00000621269 LILRA5A6NI73 299 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 B8ZZF3 427 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 VCLP18206 1134 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 UGT1A3P35503 534 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 MARCKSL1P49006 195 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 MC2RQ01718 297 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 TMEM115Q12893 351 aaPredicted RBP23.65■■□□□ 1.38
ATXN3-253ENST00000621269 SEPT7Q16181 437 aaKnown RBP23.65■■□□□ 1.38
ATXN3-253ENST00000621269 LINC00303Q3SY05 128 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 CCDC181Q5TID7 509 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 BMPERQ8N8U9 685 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 IPMKQ8NFU5 416 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 BRSK1Q8TDC3 778 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 MRGPRX2Q96LB1 330 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 HEMGNQ9BXL5 484 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 SCHIP1Q9P0W5 487 aaPredicted RBP23.65■■□□□ 1.38
ATXN3-253ENST00000621269 RSPH14Q9UHP6 348 aa23.65■■□□□ 1.38
ATXN3-253ENST00000621269 ZFC3H1O60293 1989 aaKnown RBP23.64■■□□□ 1.38
ATXN3-253ENST00000621269 WT1P19544 449 aaPredicted RBP23.64■■□□□ 1.37
ATXN3-253ENST00000621269 HLA-DPA1P20036 260 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 IDSP22304 550 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 SPAM1P38567 509 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 MPP3Q13368 585 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 SLC1A5Q15758 541 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 PPP2R5EQ16537 467 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 CEACAM20Q6UY09 585 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 GLT6D1Q7Z4J2 308 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 TRAPPC5Q8IUR0 188 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 ZNF547Q8IVP9 402 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 CACNA2D3Q8IZS8 1091 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 TTC30BQ8N4P2 665 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 EXD3Q8N9H8 876 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 BLOC1S5Q8TDH9 187 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 OXNAD1Q96HP4 312 aaPredicted RBP23.64■■□□□ 1.37
ATXN3-253ENST00000621269 CTRCQ99895 268 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 FERMT1Q9BQL6 677 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 ZPBPQ9BS86 351 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 FSD1LQ9BXM9 530 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 IL26Q9NPH9 171 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 FBXO8Q9NRD0 319 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 TMPRSS11EQ9UL52 423 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 PKP3Q9Y446 797 aa23.64■■□□□ 1.37
ATXN3-253ENST00000621269 H7C0C1 242 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 RAD1O60671 282 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 RPL10P27635 214 aaKnown RBP23.63■■□□□ 1.37
ATXN3-253ENST00000621269 CHRNA4P43681 627 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 ATP5OP48047 213 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 CYP4F2P78329 520 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 XRCC4Q13426 336 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 KHDC1Q4VXA5 237 aaKnown RBP23.63■■□□□ 1.37
ATXN3-253ENST00000621269 TMEM26Q6ZUK4 368 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 BBS12Q6ZW61 710 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 DTX3LQ8TDB6 740 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 KRT35Q92764 455 aa23.63■■□□□ 1.37
ATXN3-253ENST00000621269 ZCCHC2Q9C0B9 1178 aaKnown RBP23.63■■□□□ 1.37
ATXN3-253ENST00000621269 ZNF624Q9P2J8 865 aaPredicted RBP23.63■■□□□ 1.37
ATXN3-253ENST00000621269 UBXN7O94888 489 aa23.62■■□□□ 1.37
ATXN3-253ENST00000621269 AMD1P17707 334 aa23.62■■□□□ 1.37
ATXN3-253ENST00000621269 SLC19A1P41440 591 aa23.62■■□□□ 1.37
ATXN3-253ENST00000621269 NAP1L1P55209 391 aaKnown RBP23.62■■□□□ 1.37
ATXN3-253ENST00000621269 COPS2P61201 443 aa23.62■■□□□ 1.37
ATXN3-253ENST00000621269 TBR1Q16650 682 aa23.62■■□□□ 1.37
ATXN3-253ENST00000621269 ABRAXAS1Q6UWZ7 409 aa23.62■■□□□ 1.37
ATXN3-253ENST00000621269 RTP4Q96DX8 246 aa23.62■■□□□ 1.37
ATXN3-253ENST00000621269 CALR3Q96L12 384 aaKnown RBP23.62■■□□□ 1.37
ATXN3-253ENST00000621269 POT1Q9NUX5 634 aa23.62■■□□□ 1.37
ATXN3-253ENST00000621269 IL17CQ9P0M4 197 aa23.62■■□□□ 1.37
ATXN3-253ENST00000621269 MN1Q10571 1320 aaPredicted RBP23.61■■□□□ 1.37
ATXN3-253ENST00000621269 GLYATL1P3A0A0U1RQE8 302 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 J3QKU1 62 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 APOC4-APOC2K7ER74 178 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 KCNJ13O60928 360 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 PPFIA2O75334 1257 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 IPO7O95373 1038 aaKnown RBP23.61■■□□□ 1.37
ATXN3-253ENST00000621269 APOC2P02655 101 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 SFTPCP11686 197 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 LIFP15018 202 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 TYRP1P17643 537 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 DRG2P55039 364 aaKnown RBP23.61■■□□□ 1.37
ATXN3-253ENST00000621269 CHRNA6Q15825 494 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 LDLRAP1Q5SW96 308 aa23.61■■□□□ 1.37
ATXN3-253ENST00000621269 AGAP9Q5VTM2 703 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms