RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 CHERPQ8IWX8 916 aaKnown RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 CBR4Q8N4T8 237 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 FNDC5Q8NAU1 212 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 EID2BQ96D98 161 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 MPP4Q96JB8 637 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 ELAC1Q9H777 363 aaKnown RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 CCM2LQ9NUG4 571 aaPredicted RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 TRPM5Q9NZQ8 1165 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 ABCD2Q9UBJ2 740 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 SRRDQ9UH36 339 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 COMMD10Q9Y6G5 202 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 A0A1B0GVM2 712 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 A0A1W2PP18 115 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 H3BSA7 217 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 E2F3O00716 465 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 ARPC2O15144 300 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 SYNCRIPO60506 623 aaKnown RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 TBL1XO60907 577 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 MATN4O95460 622 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 GUCA1CO95843 209 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 MT-ND1P03886 318 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 COL6A1P12109 1028 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 IL10P22301 178 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 IL12AP29459 219 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 TUFMP49411 452 aaKnown RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 ALDH7A1P49419 539 aaKnown RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 LSAMPQ13449 338 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 TIGD2Q4W5G0 525 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 KRT80Q6KB66 452 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 ERMP1Q7Z2K6 904 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 SPATA19Q7Z5L4 167 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 NPAS4Q8IUM7 802 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 OR56A4Q8NGH8 313 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 ZUFSPQ96AP4 578 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 DUS3LQ96G46 650 aaKnown RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 CDK5RAP1Q96SZ6 601 aaKnown RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 UHRF1Q96T88 793 aaPredicted RBP11.09□□□□□ -0.63
TP53-223ENST00000618944 OSBPL11Q9BXB4 747 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 GPR63Q9BZJ6 419 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 TM6SF2Q9BZW4 377 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 VCX3AQ9NNX9 186 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 ARMC1Q9NVT9 282 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 ZMYM5Q9UJ78 669 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 PCDHA9Q9Y5H5 950 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 GREB1Q4ZG55 1949 aa11.09□□□□□ -0.63
TP53-223ENST00000618944 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 VPS4BO75351 444 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 MLYCDO95822 493 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 GKP32189 559 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 CA5AP35218 305 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 CCL23P55773 120 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 RHOAP61586 193 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 LIPEQ05469 1076 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 MTA1Q13330 715 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 TGFBIQ15582 683 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 CYP51A1Q16850 503 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 PRMT9Q6P2P2 845 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 NCEH1Q6PIU2 408 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 FAM151BQ6UXP7 276 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 LYSMD3Q7Z3D4 306 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 CMTR2Q8IYT2 770 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 TTC30BQ8N4P2 665 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 TRIML2Q8N7C3 387 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 PAF1Q8N7H5 531 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 ANKFN1Q8N957 763 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 SLC43A3Q8NBI5 491 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 TSPAN14Q8NG11 270 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 METTL6Q8TCB7 284 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 C2orf15Q8WU43 125 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 TMEM125Q96AQ2 219 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 TMIGD2Q96BF3 282 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 ZFRQ96KR1 1074 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 DDX18Q9NVP1 670 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 AIG1Q9NVV5 245 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 DUS2Q9NX74 493 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 NDUFA13Q9P0J0 144 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 RNF103-CHMP3A0A140T963 221 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 STX16O14662 325 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 PFDN6O15212 129 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 GNAO1P09471 354 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 CNPP09543 421 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 BMP2P12643 396 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 PSMA4P25789 261 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 ZFP36L2P47974 494 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 GSK3BP49841 420 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 HTR6P50406 440 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 POLR2JP52435 117 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 CDH15P55291 814 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 TXNL4AP83876 142 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 ILF2Q12905 390 aaKnown RBP11.08□□□□□ -0.64
TP53-223ENST00000618944 INPP5AQ14642 412 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 C6orf136Q5SQH8 315 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 PPP4R4Q6NUP7 873 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 LETMD1Q6P1Q0 360 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 TXNDC11Q6PKC3 985 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 SLC2A7Q6PXP3 512 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 Q6ZSR9 355 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 FRA10AC1Q70Z53 315 aa11.08□□□□□ -0.64
TP53-223ENST00000618944 RALGPS2Q86X27 583 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms