RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 BCAT1P54687 386 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 STXBP1P61764 594 aaKnown RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 MPP1Q00013 466 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 YAF2Q8IY57 180 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 DEDD2Q8WXF8 326 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 A0A088AWK7 358 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 E9PI62 339 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF10P21506 573 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 RPL38P63173 70 aaKnown RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 COTL1Q14019 142 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 PAMR1Q6UXH9 720 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 RAD51AP1Q96B01 352 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 DHX33Q9H6R0 707 aaKnown RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ACSS3Q9H6R3 686 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 LRRIQ1Q96JM4 1722 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 TMBIM6P55061 237 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF674Q2M3X9 581 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 MOB2Q70IA6 237 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ANKRD13BQ86YJ7 626 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 OR5T3Q8NGG3 340 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 MALSU1Q96EH3 234 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 CPVLQ9H3G5 476 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 SEMA3GQ9NS98 782 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 GULP1Q9UBP9 304 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 CNOT11Q9UKZ1 510 aaKnown RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 CDC42BPAQ5VT25 1732 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 TEX51A0A1B0GUA7 166 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 MCIDASD6RGH6 385 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 AFF3P51826 1226 aaKnown RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 POLR2JP52435 117 aaKnown RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 TEAD4Q15561 434 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 C10orf120Q5SQS8 335 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 SPATA33Q96N06 139 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 SLITRK1Q96PX8 696 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 TRMOQ9BU70 441 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 INPPL1O15357 1258 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 ACSL4O60488 711 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 KAT7O95251 611 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 APLP1P51693 650 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 LSM12Q3MHD2 195 aaKnown RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 GLT6D1Q7Z4J2 308 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 PEX13Q92968 403 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 INPP4AQ96PE3 977 aaPredicted RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 FAIMQ9NVQ4 179 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 MTA2O94776 668 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 CYP11A1P05108 521 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 PGAM2P15259 253 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 AGTR1P30556 359 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 MTMR2Q13614 643 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 RTL4Q6ZR62 310 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 DDX1Q92499 740 aaKnown RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 LMAN2LQ9H0V9 348 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 ABHD14A-ACY1A0A1B0GW23 586 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 DLGAP1O14490 977 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 FBXO21O94952 628 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 KELP23276 732 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 DNASE1P24855 282 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 IQCCQ4KMZ1 466 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 DUPD1Q68J44 220 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 OR4A15Q8NGL6 344 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 IDI2Q9BXS1 227 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 C17orf75Q9HAS0 396 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 C13orf42A0A1B0GVH6 325 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 PABPC4LP0CB38 370 aaKnown RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 ADH6P28332 368 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 HNRNPFP52597 415 aaKnown RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 EXOC3L2Q2M3D2 409 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 RFTN2Q52LD8 501 aaPredicted RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 MCOLN2Q8IZK6 566 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 PHTF2Q8N3S3 785 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 PACRGLQ8N7B6 248 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 MED30Q96HR3 178 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 TLR6Q9Y2C9 796 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 OR6C6A6NF89 314 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 AGAP5A6NIR3 686 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 F5H5T6 163 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 SLC28A2O43868 658 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 RGS9O75916 674 aaPredicted RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 ZDHHC11BP0C7U3 371 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 SLC11A2P49281 568 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 ZNHIT3Q15649 155 aaPredicted RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 ALG10Q5BKT4 473 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 TMEM185BQ9H7F4 350 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 DDX43Q9NXZ2 648 aaKnown RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 TSPAN15O95858 294 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 OTCP00480 354 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 FMO3P31513 532 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 NPTX1Q15818 432 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 GPR139Q6DWJ6 353 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 TMEM192Q8IY95 271 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 GIMAP5Q96F15 307 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 C7orf26Q96N11 449 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 SYT15Q9BQS2 421 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 ARHGEF4Q9NR80 690 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 PIH1D1Q9NWS0 290 aaKnown RBP14.91□□□□□ -0.02
COL5A1-208ENST00000618395 TTC34A8MYJ7 566 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 K7EPI3 171 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 CABYRO75952 493 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 CAV3P56539 151 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 TMEM44Q2T9K0 475 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms