RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CHN1P15882 459 aa12□□□□□ -0.49
SRRT-216ENST00000618262 HLA-FP30511 346 aa12□□□□□ -0.49
SRRT-216ENST00000618262 HARS2P49590 506 aaKnown RBP12□□□□□ -0.49
SRRT-216ENST00000618262 CDKN1CP49918 316 aaPredicted RBP12□□□□□ -0.49
SRRT-216ENST00000618262 FAM153CQ494X1 144 aa12□□□□□ -0.49
SRRT-216ENST00000618262 C11orf63Q6NUN7 778 aa12□□□□□ -0.49
SRRT-216ENST00000618262 AAGABQ6PD74 315 aa12□□□□□ -0.49
SRRT-216ENST00000618262 TBC1D19Q8N5T2 526 aa12□□□□□ -0.49
SRRT-216ENST00000618262 FITM2Q8N6M3 262 aa12□□□□□ -0.49
SRRT-216ENST00000618262 UBL4BQ8N7F7 174 aa12□□□□□ -0.49
SRRT-216ENST00000618262 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
SRRT-216ENST00000618262 ZFP28Q8NHY6 868 aa12□□□□□ -0.49
SRRT-216ENST00000618262 FGF14Q92915 247 aa12□□□□□ -0.49
SRRT-216ENST00000618262 SERPINB11Q96P15 392 aa12□□□□□ -0.49
SRRT-216ENST00000618262 GIMAP4Q9NUV9 329 aa12□□□□□ -0.49
SRRT-216ENST00000618262 FAM153AQ9UHL3 310 aa12□□□□□ -0.49
SRRT-216ENST00000618262 AGO1Q9UL18 857 aaKnown RBP12□□□□□ -0.49
SRRT-216ENST00000618262 SNX12Q9UMY4 172 aa12□□□□□ -0.49
SRRT-216ENST00000618262 ARL2BPQ9Y2Y0 163 aa12□□□□□ -0.49
SRRT-216ENST00000618262 HCN4Q9Y3Q4 1203 aa12□□□□□ -0.49
SRRT-216ENST00000618262 MYOFQ9NZM1 2061 aa12□□□□□ -0.49
SRRT-216ENST00000618262 F5P12259 2224 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 TAF4O00268 1085 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 LEFTY2O00292 366 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 LRIG2O94898 1065 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 NUDT1P36639 197 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 RAB14P61106 215 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 EFTUD2Q15029 972 aaKnown RBP eCLIP11.99□□□□□ -0.496e-7■■■■□ 22.9
SRRT-216ENST00000618262 KHDC1Q4VXA5 237 aaKnown RBP11.99□□□□□ -0.49
SRRT-216ENST00000618262 EFHC2Q5JST6 749 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 NADSYN1Q6IA69 706 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 TANGO2Q6ICL3 276 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 PARM1Q6UWI2 310 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 ZDHHC14Q8IZN3 488 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 LGI2Q8N0V4 545 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 GALNT11Q8NCW6 608 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 ZNF680Q8NEM1 530 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 ADAMTS19Q8TE59 1207 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 CD101Q93033 1021 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 IGSF8Q969P0 613 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 MARC2Q969Z3 335 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 ZC3H10Q96K80 434 aaKnown RBP11.99□□□□□ -0.49
SRRT-216ENST00000618262 EBF3Q9H4W6 596 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 TDP1Q9NUW8 608 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 MTMR10Q9NXD2 777 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 ZDHHC7Q9NXF8 308 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 ACTL7AQ9Y615 435 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 BTNL10A8MVZ5 291 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 CST8O60676 142 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 ENDOD1O94919 500 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 CCNDBP1O95273 360 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 MTM1Q13496 603 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 TRIP13Q15645 432 aaPredicted RBP11.99□□□□□ -0.49
SRRT-216ENST00000618262 TBRG1Q3YBR2 411 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 IZUMO2Q6UXV1 221 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 GPR149Q86SP6 731 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 VPS33AQ96AX1 596 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 ZFRQ96KR1 1074 aaKnown RBP11.99□□□□□ -0.49
SRRT-216ENST00000618262 ECSITQ9BQ95 431 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 BCL7BQ9BQE9 202 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 GLRX2Q9NS18 164 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 SACM1LQ9NTJ5 587 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 STX18Q9P2W9 335 aaKnown RBP11.99□□□□□ -0.49
SRRT-216ENST00000618262 CLEC4EQ9ULY5 219 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 MRPS7Q9Y2R9 242 aaKnown RBP11.99□□□□□ -0.49
SRRT-216ENST00000618262 PCDHA3Q9Y5H8 950 aa11.99□□□□□ -0.49
SRRT-216ENST00000618262 TTC28Q96AY4 2481 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 KCNU1A8MYU2 1149 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 AXIN1O15169 862 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 ATP6V1B1P15313 513 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 PCSK2P16519 638 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 KDELR1P24390 212 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 GDI1P31150 447 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 NUP107P57740 925 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 ATP6V0D1P61421 351 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 MS4A13Q5J8X5 152 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 PRSS36Q5K4E3 855 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 MACC1Q6ZN28 852 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.98□□□□□ -0.49
SRRT-216ENST00000618262 NT5C3BQ969T7 300 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 ZSCAN5AQ9BUG6 496 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 TP63Q9H3D4 680 aaPredicted RBP11.98□□□□□ -0.49
SRRT-216ENST00000618262 GTSE1Q9NYZ3 720 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 MBD1Q9UIS9 605 aaPredicted RBP11.98□□□□□ -0.49
SRRT-216ENST00000618262 FZD10Q9ULW2 581 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
SRRT-216ENST00000618262 LAMA1P25391 3075 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 OTOL1A6NHN0 477 aaPredicted RBP11.98□□□□□ -0.49
SRRT-216ENST00000618262 DPYSL4O14531 572 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 CLPTM1O96005 669 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 CXCR3P49682 368 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 C21orf59P57076 290 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 RNF4P78317 190 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 ZNF844Q08AG5 666 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 AUHQ13825 339 aaKnown RBP11.98□□□□□ -0.49
SRRT-216ENST00000618262 DOC2AQ14183 400 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 DPYSL3Q14195 570 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 NADK2Q4G0N4 442 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 ARHGAP15Q53QZ3 475 aa11.98□□□□□ -0.49
SRRT-216ENST00000618262 FBXO48Q5FWF7 155 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms