RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 YTHDF3Q7Z739 585 aaKnown RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 DAAM2Q86T65 1068 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 NLRP8Q86W28 1048 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 FAM129CQ86XR2 697 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 ARHGAP12Q8IWW6 846 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 SLC15A3Q8IY34 581 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 NRSN1Q8IZ57 195 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 CEP112Q8N8E3 955 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 SUN5Q8TC36 379 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 ZDHHC1Q8WTX9 485 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 FUBP1Q96AE4 644 aaKnown RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 ZNF653Q96CK0 615 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 ANKRD27Q96NW4 1050 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 SNRNP25Q9BV90 132 aaKnown RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 B3GNT4Q9C0J1 378 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 SLC39A1Q9NY26 324 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 TUBD1Q9UJT1 453 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 G3BP2Q9UN86 482 aaKnown RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 PPIL1Q9Y3C6 166 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 CLEC18AA5D8T8 446 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 EFCAB7A8K855 629 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 A8MX80 341 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 MYO1FO00160 1098 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 PSMD11O00231 422 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 HGSO14964 777 aaPredicted RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 BIRC5O15392 142 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 MTSS1O43312 755 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 HTRA2O43464 458 aaPredicted RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 BUB1BO60566 1050 aaPredicted RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 DIAPH2O60879 1101 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 RECQL5O94762 991 aaPredicted RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 CYP1A2P05177 515 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 BTF3P20290 206 aaKnown RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 CD9P21926 228 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 CD1CP29017 333 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 CSTF2P33240 577 aaKnown RBP eCLIP8.5□□□□□ -1.05
GPC6-202ENST00000617456 LMAN1P49257 510 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 KIAA1024LP59773 190 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 FANCCQ00597 558 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 LBRQ14739 615 aaKnown RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 BCL2A1Q16548 175 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 HADHQ16836 314 aaKnown RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 DEFB109BQ30KR1 87 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 NXNQ6DKJ4 435 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 CLEC18BQ6UXF7 455 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 ZSWIM9Q86XI8 627 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 VSIG1Q86XK7 387 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 CAMK1DQ8IU85 385 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 MAP7D3Q8IWC1 876 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 UNC5BQ8IZJ1 945 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 CBARPQ8N350 705 aaPredicted RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 PAF1Q8N7H5 531 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 TSEN2Q8NCE0 465 aaKnown RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 CLEC18CQ8NCF0 446 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 GPBAR1Q8TDU6 330 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 NSMCE1Q8WV22 266 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 CATSPER2Q96P56 530 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 NUDCD1Q96RS6 583 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 PEBP4Q96S96 227 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 KCTD15Q96SI1 283 aaPredicted RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 CINPQ9BW66 212 aaPredicted RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 LGR4Q9BXB1 951 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 CDH19Q9H159 772 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 GPN2Q9H9Y4 310 aaPredicted RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 CARS2Q9HA77 564 aaKnown RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 CLK4Q9HAZ1 481 aaKnown RBP8.5□□□□□ -1.05
GPC6-202ENST00000617456 SP110Q9HB58 689 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 OCIAD1Q9NX40 245 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 UVRAGQ9P2Y5 699 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 PRELID1Q9Y255 219 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 PCDHGA3Q9Y5H0 932 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 LRP4O75096 1905 aa8.5□□□□□ -1.05
GPC6-202ENST00000617456 ANKRD36A6QL64 1941 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 PRSS38A1L453 326 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ZNF487B1APH4 448 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ZW10O43264 779 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 MGRN1O60291 552 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 MAFKO60675 156 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 PEX11BO96011 259 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 FGF1P05230 155 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ELFN1P0C7U0 828 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 RARAP10276 462 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ALOX15P16050 662 aaPredicted RBP8.49□□□□□ -1.05
GPC6-202ENST00000617456 NR1D1P20393 614 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 AK4P27144 223 aaPredicted RBP8.49□□□□□ -1.05
GPC6-202ENST00000617456 TSPAN7P41732 249 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 GNPDA1P46926 289 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 LIMK2P53671 638 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 CDC20Q12834 499 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 TRIM14Q14142 442 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 MAP7Q14244 749 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 PDK2Q15119 407 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 CA9Q16790 459 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 LACTB2Q53H82 288 aaPredicted RBP8.49□□□□□ -1.05
GPC6-202ENST00000617456 PPP6R3Q5H9R7 873 aaPredicted RBP8.49□□□□□ -1.05
GPC6-202ENST00000617456 SNAP47Q5SQN1 464 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 ATP1A1-AS1Q5TC04 95 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 MARC1Q5VT66 337 aa8.49□□□□□ -1.05
GPC6-202ENST00000617456 E4F1Q66K89 784 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms