RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 CHD9Q3L8U1 2897 aa15.22■□□□□ 0.03
NOP56-220ENST00000616692 A8MV72 311 aaPredicted RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 TERTO14746 1132 aaKnown RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 CDC123O75794 336 aaPredicted RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 TIMP2P16035 220 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 GBX2P52951 348 aaPredicted RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 ZNF91Q05481 1191 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 GEN1Q17RS7 908 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 KRBOX4Q5JUW0 171 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 TTC33Q6PID6 262 aaPredicted RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 LRFN4Q6PJG9 635 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 KCTD8Q6ZWB6 473 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 UBQLNLQ8IYU4 475 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 MPP5Q8N3R9 675 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 LIX1Q8N485 282 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 ARFGAP1Q8N6T3 406 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 ATG16L2Q8NAA4 619 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 RIT1Q92963 219 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 ASB7Q9H672 318 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 MBD1Q9UIS9 605 aaPredicted RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 C17orf102A2RUQ5 167 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 H3BNC9 293 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 SERPING1P05155 500 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 ACADMP11310 421 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 PTPN1P18031 435 aaKnown RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 SLC9A1P19634 815 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 RPL10P27635 214 aaKnown RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 EPHA3P29320 983 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 HOXC12P31275 282 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 ATP5C1P36542 298 aaKnown RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 PPP5CP53041 499 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 HAND2P61296 217 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 STX5Q13190 355 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 ZNF181Q2M3W8 571 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 TCTE1Q5JU00 501 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 SLC9A9Q8IVB4 645 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 DCP1BQ8IZD4 617 aaKnown RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 GLB1L3Q8NCI6 653 aaPredicted RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 DEPDC1BQ8WUY9 529 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 VPS39Q96JC1 886 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 ZC3H10Q96K80 434 aaKnown RBP15.21■□□□□ 0.03
NOP56-220ENST00000616692 AAASQ9NRG9 546 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 EVA1BQ9NVM1 165 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 PCYOX1Q9UHG3 505 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 TMPRSS11EQ9UL52 423 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 DGKBQ9Y6T7 804 aa15.21■□□□□ 0.03
NOP56-220ENST00000616692 PTAFRP25105 342 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 EIF2DP41214 584 aaKnown RBP15.2■□□□□ 0.02
NOP56-220ENST00000616692 PMS1P54277 932 aaKnown RBP15.2■□□□□ 0.02
NOP56-220ENST00000616692 SPCS3P61009 180 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 PLIN5Q00G26 463 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 CDH17Q12864 832 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 ADAM15Q13444 863 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 KCNC3Q14003 757 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 STAT4Q14765 748 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 ZNF169Q14929 603 aaPredicted RBP15.2■□□□□ 0.02
NOP56-220ENST00000616692 TARBP2Q15633 366 aaKnown RBP15.2■□□□□ 0.02
NOP56-220ENST00000616692 GPR68Q15743 365 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 ZNF852Q6ZMS4 543 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 LILRA2Q8N149 483 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 CYP4Z2PQ8N1L4 340 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 ANKFN1Q8N957 763 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 RFFLQ8WZ73 363 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 LRRC39Q96DD0 335 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 ELP4Q96EB1 424 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 C16orf70Q9BSU1 422 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 PAPOLGQ9BWT3 736 aaKnown RBP15.2■□□□□ 0.02
NOP56-220ENST00000616692 BLZF1Q9H2G9 400 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 LRRC4Q9HBW1 653 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 ABCB10Q9NRK6 738 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 SNX15Q9NRS6 342 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 UFSP2Q9NUQ7 469 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 TMLHEQ9NVH6 421 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 RAPGEFL1Q9UHV5 662 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 TLK1Q9UKI8 766 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 KRT87PA6NCN2 255 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 SGCEO43556 437 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 CD63P08962 238 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 PRG2P13727 222 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 CSKP41240 450 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 IL12RB1P42701 662 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 MBTPS1Q14703 1052 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 SETMARQ53H47 684 aaPredicted RBP15.2■□□□□ 0.02
NOP56-220ENST00000616692 FBXO48Q5FWF7 155 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 SLFN12LQ6IEE8 588 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 GJD3Q8N144 294 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 SCML4Q8N228 414 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 FBXW8Q8N3Y1 598 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 PPP1R13LQ8WUF5 828 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 TOP1MTQ969P6 601 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 PABPC5Q96DU9 382 aaKnown RBP15.2■□□□□ 0.02
NOP56-220ENST00000616692 POM121Q96HA1 1249 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 CNOT6LQ96LI5 555 aaKnown RBP15.2■□□□□ 0.02
NOP56-220ENST00000616692 KLHL15Q96M94 604 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 SPATA33Q96N06 139 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 SLC2A13Q96QE2 648 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 EFCAB1Q9HAE3 211 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 FBXO10Q9UK96 956 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 ACSL5Q9ULC5 683 aa15.2■□□□□ 0.02
NOP56-220ENST00000616692 PCDHGA7Q9Y5G6 932 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms