RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CYP2S1Q96SQ9 504 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 TRHDEQ9UKU6 1024 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 VPS4AQ9UN37 437 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 AAR2Q9Y312 384 aaKnown RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 PCDHGA11Q9Y5H2 935 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 A8MX80 341 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 JRKO75564 520 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 CHRNB1P11230 501 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 FCGR1AP12314 374 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 ZNF37AP17032 561 aaPredicted RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 ZNF280AP59817 542 aaPredicted RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 DAG1Q14118 895 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 SMN1Q16637 294 aaKnown RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 LCN8Q6JVE9 175 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 SPRED1Q7Z699 444 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 RBM23Q86U06 439 aaKnown RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 MTMR14Q8NCE2 650 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 PARVBQ9HBI1 364 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 INTS10Q9NVR2 710 aaKnown RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 ERVK-18Q9QC07 812 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 FYNP06241 537 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 GPIP06744 558 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 CLK1P49759 484 aaKnown RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 SOX4Q06945 474 aaPredicted RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 C6orf141Q5SZD1 244 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 CLEC20AQ6ZU45 233 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 ISCA2Q86U28 154 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 ANKRD13BQ86YJ7 626 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 CLHC1Q8NHS4 586 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 MCOLN3Q8TDD5 553 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 FAM162AQ96A26 154 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 GLOD4Q9HC38 313 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 KIAA1522Q9P206 1035 aaPredicted RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 LOC100506127A0A0U1RQW1 187 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 SEC14L2O76054 403 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 CAPN1P07384 714 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 EPS8Q12929 822 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 OR4D1Q15615 310 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 ARMCX2Q7L311 632 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 FAM126BQ8IXS8 530 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 DCP1BQ8IZD4 617 aaKnown RBP13.05□□□□□ -0.32
MSH6-214ENST00000616033 OR10A6Q8NH74 314 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 PMEPA1Q969W9 287 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 CCDC126Q96EE4 140 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 TNIP3Q96KP6 325 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 RNF112Q9ULX5 631 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 OAS3Q9Y6K5 1087 aaKnown RBP13.05□□□□□ -0.32
MSH6-214ENST00000616033 IGKV6-21A0A0C4DH24 114 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 MYBPHLA2RUH7 354 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 DAB1O75553 588 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 UGT2B4P06133 528 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 PSMD5Q16401 504 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 ADPRMQ3LIE5 342 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 ATAD3BQ5T9A4 648 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 SLC22A9Q8IVM8 553 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 DTWD1Q8N5C7 304 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 HSFY1Q96LI6 401 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 DOK1Q99704 481 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 DUSP16Q9BY84 665 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 SLC39A8Q9C0K1 460 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 REXO4Q9GZR2 422 aaKnown RBP13.05□□□□□ -0.32
MSH6-214ENST00000616033 SPATC1LQ9H0A9 340 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 GALPQ9UBC7 116 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 SARDHQ9UL12 918 aa13.05□□□□□ -0.32
MSH6-214ENST00000616033 MCM3APO60318 1980 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 MGEA5O60502 916 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 SLC22A3O75751 556 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 GOT2P00505 430 aaKnown RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 GSNP06396 782 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 HRH2P25021 359 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 FMO4P31512 558 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 RACK1P63244 317 aaKnown RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 CYP4F2P78329 520 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 ADARB1P78563 741 aaKnown RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 CYP4F3Q08477 520 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 VAC14Q08AM6 782 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 VGLL4Q14135 290 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 E2F2Q14209 437 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 DPY19L1Q2PZI1 675 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 CCDC58Q4VC31 144 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 UGT3A1Q6NUS8 523 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 GALNT10Q86SR1 603 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 AKAP14Q86UN6 197 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 OMA1Q96E52 524 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 GAD1Q99259 594 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 ZMYM5Q9UJ78 669 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 A0A0U1RQS6 177 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 FZD9O00144 591 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 SOAT2O75908 522 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 ANXA9O76027 345 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 CYBBP04839 570 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 IFNA8P32881 189 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 POLR2JP52435 117 aaKnown RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 KCTD2Q14681 263 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 FAM98BQ52LJ0 330 aaKnown RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 PHACTR4Q8IZ21 702 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 C2CD4AQ8NCU7 369 aaPredicted RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 UBE2FQ969M7 185 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms