RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 BCAP29Q9UHQ4 241 aa18.95■□□□□ 0.62
MMP28-204ENST00000615136 SLC30A1Q9Y6M5 507 aa18.95■□□□□ 0.62
MMP28-204ENST00000615136 LYNP07948 512 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 SERPINA4P29622 427 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 RPL26P61254 145 aaKnown RBP18.94■□□□□ 0.62
MMP28-204ENST00000615136 SNRPD1P62314 119 aaKnown RBP18.94■□□□□ 0.62
MMP28-204ENST00000615136 HERVK_113P63132 956 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 UBE3AQ05086 875 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 PTK2BQ14289 1009 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 TRIP10Q15642 601 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 OGFRL1Q5TC84 451 aaPredicted RBP18.94■□□□□ 0.62
MMP28-204ENST00000615136 RFLNAQ6ZTI6 216 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 SERPINA9Q86WD7 417 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 CPNE9Q8IYJ1 553 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 PQLC1Q8N2U9 271 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 ST13P5Q8NFI4 369 aaPredicted RBP18.94■□□□□ 0.62
MMP28-204ENST00000615136 RHEBL1Q8TAI7 183 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 ERVK-6Q9BXR3 956 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 ZDHHC6Q9H6R6 413 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 CERS4Q9HA82 394 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 SYTL2Q9HCH5 934 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 PRSS21Q9Y6M0 314 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 ANKRD12Q6UB98 2062 aa18.94■□□□□ 0.62
MMP28-204ENST00000615136 ZNF106Q9H2Y7 1883 aaKnown RBP18.94■□□□□ 0.62
MMP28-204ENST00000615136 A0A1B0GTL3 188 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 SMIM24O75264 130 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 ECI2O75521 394 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 FGF19O95750 216 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 CHRM3P20309 590 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 ME2P23368 584 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 HOXA9P31269 272 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 PTGER3P43115 390 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 MAPK8P45983 427 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 RAD51Q06609 339 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 MAPRE2Q15555 327 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 ZFP1Q6P2D0 407 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 CRTC1Q6UUV9 634 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 CYHR1Q6ZMK1 362 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 GK5Q6ZS86 529 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 LKAAEAR1Q8TD35 194 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 FUBP1Q96AE4 644 aaKnown RBP18.93■□□□□ 0.62
MMP28-204ENST00000615136 RSPRY1Q96DX4 576 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 NPAS2Q99743 824 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 TSR3Q9UJK0 312 aaKnown RBP18.93■□□□□ 0.62
MMP28-204ENST00000615136 BTN3A1O00481 513 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 KERAO60938 352 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 VPS26AO75436 327 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 WEE1P30291 646 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 PSMD8P48556 350 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 CLCN7P51798 805 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 AQP4P55087 323 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 PKNOX1P55347 436 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 LRRC36Q1X8D7 754 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 TMEM126BQ8IUX1 230 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 CLDN19Q8N6F1 224 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 GRIN3AQ8TCU5 1115 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 DLG3Q92796 817 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 ECHDC3Q96DC8 303 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 MCOLN1Q9GZU1 580 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 ASB8Q9H765 288 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 PDP2Q9P2J9 529 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 RNF112Q9ULX5 631 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 TRAF6Q9Y4K3 522 aa18.93■□□□□ 0.62
MMP28-204ENST00000615136 NCF1BA6NI72 391 aaPredicted RBP18.92■□□□□ 0.62
MMP28-204ENST00000615136 NCF1CA8MVU1 366 aaPredicted RBP18.92■□□□□ 0.62
MMP28-204ENST00000615136 SUPT3HB4E1H0 165 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 UBDO15205 165 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 XYLBO75191 536 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 SUPT3HO75486 399 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 BCAS2O75934 225 aaPredicted RBP18.92■□□□□ 0.62
MMP28-204ENST00000615136 UGT2B4P06133 528 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 HNRNPA1P09651 372 aaKnown RBP eCLIP18.92■□□□□ 0.62
MMP28-204ENST00000615136 NCF1P14598 390 aaPredicted RBP18.92■□□□□ 0.62
MMP28-204ENST00000615136 UQCRBP14927 111 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 LHCGRP22888 699 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 SH3BP2P78314 561 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 ECT2LQ008S8 904 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 CHRNA6Q15825 494 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 PPP1R3AQ16821 1122 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 GEN1Q17RS7 908 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 AARS2Q5JTZ9 985 aaKnown RBP18.92■□□□□ 0.62
MMP28-204ENST00000615136 METTL3Q86U44 580 aaKnown RBP18.92■□□□□ 0.62
MMP28-204ENST00000615136 GPR26Q8NDV2 337 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 CYB5D2Q8WUJ1 264 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 KCNJ9Q92806 393 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 ISG20Q96AZ6 181 aaKnown RBP18.92■□□□□ 0.62
MMP28-204ENST00000615136 LINGO1Q96FE5 620 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 MTG2Q9H4K7 406 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 SUV39H2Q9H5I1 410 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 TRMT6Q9UJA5 497 aaKnown RBP18.92■□□□□ 0.62
MMP28-204ENST00000615136 SLC25A13Q9UJS0 675 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 SARDHQ9UL12 918 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 VPS9D1Q9Y2B5 631 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 RWDD3Q9Y3V2 267 aa18.92■□□□□ 0.62
MMP28-204ENST00000615136 CFLARO15519 480 aa18.91■□□□□ 0.62
MMP28-204ENST00000615136 UBTFL6P0CB48 400 aaPredicted RBP18.91■□□□□ 0.62
MMP28-204ENST00000615136 CHRM1P11229 460 aaPredicted RBP18.91■□□□□ 0.62
MMP28-204ENST00000615136 GFAPP14136 432 aa18.91■□□□□ 0.62
MMP28-204ENST00000615136 ITGB6P18564 788 aa18.91■□□□□ 0.62
MMP28-204ENST00000615136 HK3P52790 923 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms