RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 GPC4O75487 556 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CDK14O94921 469 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 ATP5BP06576 529 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 C1SP09871 688 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 TIMP2P16035 220 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 GM2AP17900 193 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 TCN1P20061 433 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 IMPDH1P20839 514 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CALB2P22676 271 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 DDX6P26196 483 aaKnown RBP eCLIP3.4□□□□□ -1.87
LIG4-205ENST00000614526 SPAM1P38567 509 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PTGER3P43115 390 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 HSPA7P48741 367 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 RASSF2P50749 326 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 KLF10Q13118 480 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 TSTA3Q13630 321 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 KPNB1Q14974 876 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 ACOX1Q15067 660 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 SNCBQ16143 134 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CDKN3Q16667 212 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PHKG1Q16816 387 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 DUSP6Q16828 381 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PLA2G4EQ3MJ16 856 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 KHDC1Q4VXA5 237 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 SGO1Q5FBB7 561 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PARM1Q6UWI2 310 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 ACAD11Q709F0 780 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 SNX20Q7Z614 316 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 SNX32Q86XE0 403 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 GPSM1Q86YR5 675 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 MMAAQ8IVH4 418 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 LMNTD2Q8IXW0 634 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 AHI1Q8N157 1196 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 LILRA3Q8N6C8 439 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 PCDH20Q8N6Y1 951 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 CDYL2Q8N8U2 506 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 AGAP11Q8TF27 550 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 FRS2Q8WU20 508 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 NUDT8Q8WV74 236 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 OSCP1Q8WVF1 389 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 KLK6Q92876 244 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 SMARCD2Q92925 531 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 MTFMTQ96DP5 389 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 MRGPRX3Q96LB0 322 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 SAMD11Q96NU1 681 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 ATOH8Q96SQ7 321 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 RIOK2Q9BVS4 552 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 NSUN3Q9H649 340 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 DENND2DQ9H6A0 471 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 ZBTB26Q9HCK0 441 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 NKX1-2Q9UD57 310 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 TAGLN3Q9UI15 199 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 MSRAQ9UJ68 235 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 PRKAB1Q9Y478 270 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 WASF2Q9Y6W5 498 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 ALPK3Q96L96 1907 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 C16orf96A6NNT2 1141 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 STX16-NPEPL1H3BU86 382 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 SLC9A3R1O14745 358 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 FFAR3O14843 346 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 GPR42O15529 346 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CCNT2O60583 730 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 SOCS5O75159 536 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PEX11AO75192 247 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 FGF19O95750 216 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 TSPAN12O95859 305 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 ADH1CP00326 375 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 EPHX1P07099 455 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CISD3P0C7P0 127 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 ENO3P13929 434 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 GDI1P31150 447 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 POLD2P49005 469 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CLCN7P51798 805 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 HERVK_113P63132 956 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 B4GALNT1Q00973 533 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PLIN5Q00G26 463 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CLCQ05315 142 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 COL9A2Q14055 689 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 TGFBIQ15582 683 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 SLC14A2Q15849 920 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 AARS2Q5JTZ9 985 aaKnown RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 GK5Q6ZS86 529 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 RAB44Q7Z6P3 723 aaPredicted RBP3.4□□□□□ -1.87
LIG4-205ENST00000614526 VRK3Q8IV63 474 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 DEFB107AQ8IZN7 70 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 NXPE1Q8N323 547 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 OR52B6Q8NGF0 335 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 DLG3Q92796 817 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 FGF14Q92915 247 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PEX13Q92968 403 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 KIAA1191Q96A73 305 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PYCR2Q96C36 320 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CNDP1Q96KN2 507 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PLEKHG4BQ96PX9 1271 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 MYADMQ96S97 322 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 TCF12Q99081 682 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 COPS8Q99627 209 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 NPAS2Q99743 824 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 HGH1Q9BTY7 390 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms