RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 REP15Q6BDI9 236 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 CPA6Q8N4T0 437 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 RBM15BQ8NDT2 890 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 PWWP2AQ96N64 755 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 MAGEH1Q9H213 219 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 SLC30A4O14863 429 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 TFECO14948 347 aaPredicted RBP17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 LSM1O15116 133 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 CDH4P55283 916 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 DUSP28Q4G0W2 176 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 ZNF730Q6ZMV8 503 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 PTF1AQ7RTS3 328 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 HPS6Q86YV9 775 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 PARP8Q8N3A8 854 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 RIT1Q92963 219 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 PURBQ96QR8 312 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 FKBP14Q9NWM8 211 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 LGR5O75473 907 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 LRATO95237 230 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 JAM2P57087 298 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 TUBA4AP68366 448 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 DLG2Q15700 870 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 ECHDC2Q86YB7 292 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 SLC38A4Q969I6 547 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 B3GALT6Q96L58 329 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 NMUR2Q9GZQ4 415 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 MED28Q9H204 178 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 PTTG2Q9NZH5 202 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 SLIT3O75094 1523 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 BCL9LQ86UU0 1499 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 H0Y858 1186 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 H3BM21 787 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 TNFRSF11BO00300 401 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 RPS9P46781 194 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 GLUD2P49448 558 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 RBBP4Q09028 425 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 C9orf64Q5T6V5 341 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 ITFG2Q969R8 447 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 C1GALT1C1Q96EU7 318 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 ELL3Q9HB65 397 aaPredicted RBP17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 RAB23Q9ULC3 237 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 TRIM17Q9Y577 477 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 COLEC10Q9Y6Z7 277 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 METTL18O95568 372 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 CD52P31358 61 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 IGFALSP35858 605 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 MPP5Q8N3R9 675 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 SLC22A17Q8WUG5 538 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 ZDHHC4Q9NPG8 344 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 BAIAP2Q9UQB8 552 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 MROH1Q8NDA8 1641 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 ARHGEF28Q8N1W1 1705 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 C22orf31O95567 290 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 PRNPP04156 253 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 ALDH4A1P30038 563 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 PBX3P40426 434 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 CBX5P45973 191 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 RAD51AP1Q96B01 352 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 GPN3Q9UHW5 284 aaPredicted RBP17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 RAI2Q9Y5P3 530 aa17.27■□□□□ 0.36
HMGXB3-206ENST00000613459 ABHD14A-ACY1A0A1B0GW23 586 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 B4GALT5O43286 388 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 GLUD1P00367 558 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 CDH13P55290 713 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 ANKRD23Q86SG2 305 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 ATCAYQ86WG3 371 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 SPATA6LQ8N4H0 392 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 C12orf29Q8N999 325 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 SPOCK2Q92563 424 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 AGAP2Q99490 1192 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 TRPV5Q9NQA5 729 aa17.27■□□□□ 0.35
HMGXB3-206ENST00000613459 A0A1W2PQ72 361 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 A0A1W2PQH9 124 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 E9PAM4 449 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 CLDN5O00501 218 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 MATN3O15232 486 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 MFSD11O43934 449 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 SEMA3DO95025 777 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 PGRP06401 933 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 C8GP07360 202 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 SNHG28P0DPA3 235 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 UGCGQ16739 394 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 DPY19L1Q2PZI1 675 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 HGSNATQ68CP4 663 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 MED27Q6P2C8 311 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 C2orf15Q8WU43 125 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 KCNN2Q9H2S1 579 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 RRAGCQ9HB90 399 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 RIIAD1A6NNX1 92 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 IFNA6P05013 189 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 IDSP22304 550 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 CLCQ05315 142 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 RALGDSQ12967 914 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 DCST1Q5T197 706 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 P2RY8Q86VZ1 359 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 TMEM192Q8IY95 271 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 OR4K2Q8NGD2 314 aa17.26■□□□□ 0.35
HMGXB3-206ENST00000613459 IL31RAQ8NI17 732 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms