RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 STAG3L4Q8TBR4 150 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 SLC22A17Q8WUG5 538 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 TCF12Q99081 682 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 PRPF18Q99633 342 aaKnown RBP14.57□□□□□ -0.08
CDH1-213ENST00000612417 SPON2Q9BUD6 331 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 C1QTNF3Q9BXJ4 246 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 MAGEH1Q9H213 219 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 TUBB1Q9H4B7 451 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 SNX13Q9Y5W8 968 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 IRAK3Q9Y616 596 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 CPQQ9Y646 472 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.57□□□□□ -0.08
CDH1-213ENST00000612417 AQP12BA6NM10 295 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 FXYD1O00168 92 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 NR5A2O00482 541 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 PPP6CO00743 305 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 NME4O00746 187 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 CLASP2O75122 1294 aaKnown RBP14.57□□□□□ -0.08
CDH1-213ENST00000612417 GFAPP14136 432 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 IDO1P14902 403 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 ETS2P15036 469 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 GJA1P17302 382 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 LBPP18428 481 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 CAPN3P20807 821 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 NR1H2P55055 460 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 FOXM1Q08050 763 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 BNIP2Q12982 314 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 ZNF177Q13360 481 aaPredicted RBP14.57□□□□□ -0.08
CDH1-213ENST00000612417 NRF1Q16656 503 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 EML3Q32P44 896 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 MAP7D1Q3KQU3 841 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 SETMARQ53H47 684 aaPredicted RBP14.57□□□□□ -0.08
CDH1-213ENST00000612417 MTX3Q5HYI7 312 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 IL31Q6EBC2 164 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 AFTPHQ6ULP2 937 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 CYP2R1Q6VVX0 501 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 TRIM74Q86UV6 250 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 TRIM73Q86UV7 250 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 AQP12AQ8IXF9 295 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 NSUN5Q96P11 429 aaKnown RBP14.57□□□□□ -0.08
CDH1-213ENST00000612417 PSKH2Q96QS6 385 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 SLC39A3Q9BRY0 314 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 SEMA6AQ9H2E6 1030 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 ASAH2Q9NR71 780 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 TAS2R13Q9NYV9 303 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 POLG2Q9UHN1 485 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 DMTF1Q9Y222 760 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 A0A0D9SEW6 157 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 A0A1W2PRU2 124 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 LRRC14BA6NHZ5 514 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 GRXCR1A8MXD5 290 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 CLDN11O75508 207 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 RPS17P08708 135 aaKnown RBP14.56□□□□□ -0.08
CDH1-213ENST00000612417 PRR35P0CG20 571 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 ATP6V1B2P21281 511 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 SGSHP51688 502 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 GNA12Q03113 381 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 CLCQ05315 142 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 GRIK2Q13002 908 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 GRB7Q14451 532 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 GEN1Q17RS7 908 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 IYDQ6PHW0 289 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 ERMP1Q7Z2K6 904 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 TRIM15Q9C019 465 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 SLC52A3Q9NQ40 469 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 CCM2LQ9NUG4 571 aaPredicted RBP14.56□□□□□ -0.08
CDH1-213ENST00000612417 SEPT3Q9UH03 358 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 RNF11Q9Y3C5 154 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 ARIH1Q9Y4X5 557 aaPredicted RBP14.56□□□□□ -0.08
CDH1-213ENST00000612417 PTGDR2Q9Y5Y4 395 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 OAS3Q9Y6K5 1087 aaKnown RBP14.56□□□□□ -0.08
CDH1-213ENST00000612417 SYCE1LA8MT33 242 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 STX16O14662 325 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 ANGPT2O15123 496 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 KLK8O60259 260 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 RHOCP08134 193 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 PIRTP0C851 137 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 CD9P21926 228 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 CLCN4P51793 760 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 MAP7Q14244 749 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 TAF1AQ15573 450 aaPredicted RBP14.56□□□□□ -0.08
CDH1-213ENST00000612417 LCN8Q6JVE9 175 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 PPP4R4Q6NUP7 873 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 BLOC1S3Q6QNY0 202 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 PAQR3Q6TCH7 311 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 RBM44Q6ZP01 1051 aaKnown RBP14.56□□□□□ -0.08
CDH1-213ENST00000612417 TMC8Q8IU68 726 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 DDIASQ8IXT1 998 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 SLC15A3Q8IY34 581 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 FBXO39Q8N4B4 442 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 PACRGLQ8N7B6 248 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 OR7D4Q8NG98 312 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 TRPC4APQ8TEL6 797 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 NUSAP1Q9BXS6 441 aaKnown RBP14.56□□□□□ -0.08
CDH1-213ENST00000612417 ANKRD60Q9BZ19 345 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 GRIP2Q9C0E4 1043 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 GID8Q9NWU2 228 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 RNF112Q9ULX5 631 aa14.56□□□□□ -0.08
CDH1-213ENST00000612417 CEP290O15078 2479 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 TRAV19A0A0A6YYK7 116 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms