RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 PRPF4O43172 522 aaKnown RBP eCLIP17.35■□□□□ 0.37
SREK1-216ENST00000612404 VPS26AO75436 327 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 PYGLP06737 847 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 ATP1B2P14415 290 aaPredicted RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 ITGB6P18564 788 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 CD6P30203 668 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 TIAL1Q01085 375 aaKnown RBP eCLIP17.35■□□□□ 0.377e-10■■■■■ 40.5
SREK1-216ENST00000612404 MPP2Q14168 576 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 INPP5AQ14642 412 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 KDM7AQ6ZMT4 941 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 TRIM69Q86WT6 500 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 FAM160A2Q8N612 972 aaPredicted RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 TP53I13Q8NBR0 393 aaPredicted RBP17.35■□□□□ 0.37
SREK1-216ENST00000612404 NKIRAS1Q9NYS0 192 aa17.35■□□□□ 0.37
SREK1-216ENST00000612404 TECTAO75443 2155 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 TRIM16O95361 564 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 SEPT7Q16181 437 aaKnown RBP17.34■□□□□ 0.37
SREK1-216ENST00000612404 ADAMTSL4Q6UY14 1074 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 HEATR4Q86WZ0 1026 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 CAMKK1Q8N5S9 505 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 FRMD1Q8N878 549 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 TCP10LQ8TDR4 215 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 HEXDCQ8WVB3 486 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 KCNJ9Q92806 393 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 SGF29Q96ES7 293 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 HIC2Q96JB3 615 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 GPR21Q99679 349 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 IER2Q9BTL4 223 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 GPR174Q9BXC1 333 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 C12orf65Q9H3J6 166 aaKnown RBP17.34■□□□□ 0.37
SREK1-216ENST00000612404 CNOT10Q9H9A5 744 aaKnown RBP17.34■□□□□ 0.37
SREK1-216ENST00000612404 MLXIPLQ9NP71 852 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 MED16Q9Y2X0 877 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 PIKFYVEQ9Y2I7 2098 aa17.34■□□□□ 0.37
SREK1-216ENST00000612404 H3BMM5 538 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 RAD51BO15315 384 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 CRHR1P34998 444 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 CSRP3P50461 194 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 CCR3P51677 355 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 TMEM115Q12893 351 aaPredicted RBP17.33■□□□□ 0.37
SREK1-216ENST00000612404 MACC1Q6ZN28 852 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 CDHR3Q6ZTQ4 885 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 TBC1D1Q86TI0 1168 aaPredicted RBP17.33■□□□□ 0.37
SREK1-216ENST00000612404 SPATA6LQ8N4H0 392 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 SIDT2Q8NBJ9 832 aaKnown RBP17.33■□□□□ 0.37
SREK1-216ENST00000612404 CENPTQ96BT3 561 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 TSNARE1Q96NA8 513 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 C6orf106Q9H6K1 298 aaPredicted RBP17.33■□□□□ 0.37
SREK1-216ENST00000612404 SPATA6Q9NWH7 488 aaPredicted RBP17.33■□□□□ 0.37
SREK1-216ENST00000612404 WSB2Q9NYS7 404 aaPredicted RBP17.33■□□□□ 0.37
SREK1-216ENST00000612404 GALPQ9UBC7 116 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 DCDC2Q9UHG0 476 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 TRMT6Q9UJA5 497 aaKnown RBP17.33■□□□□ 0.37
SREK1-216ENST00000612404 ANKRD6Q9Y2G4 727 aa17.33■□□□□ 0.37
SREK1-216ENST00000612404 A0A087X1B8 175 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 FSBPO95073 299 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 OR56A5P0C7T3 313 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 CHN1P15882 459 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 MAGEA9P43362 315 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 KCTD4Q8WVF5 259 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 ZCCHC2Q9C0B9 1178 aaKnown RBP17.33■□□□□ 0.36
SREK1-216ENST00000612404 OR2AG1Q9H205 316 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 WDR26Q9H7D7 661 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 MKS1Q9NXB0 559 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 DLGAP2Q9P1A6 1054 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 SLC17A7Q9P2U7 560 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 MBD1Q9UIS9 605 aaPredicted RBP17.33■□□□□ 0.36
SREK1-216ENST00000612404 OR1A2Q9Y585 309 aa17.33■□□□□ 0.36
SREK1-216ENST00000612404 OAS3Q9Y6K5 1087 aaKnown RBP17.33■□□□□ 0.36
SREK1-216ENST00000612404 OR2AG2A6NM03 316 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 GLRA3O75311 464 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 UGT3A1Q6NUS8 523 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 PLD6Q8N2A8 252 aaKnown RBP17.32■□□□□ 0.36
SREK1-216ENST00000612404 LKAAEAR1Q8TD35 194 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 ASB12Q8WXK4 309 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 PAIP2Q9BPZ3 127 aaKnown RBP17.32■□□□□ 0.36
SREK1-216ENST00000612404 UNKQ9C0B0 810 aaKnown RBP17.32■□□□□ 0.36
SREK1-216ENST00000612404 POPDC3Q9HBV1 291 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 ZNF358Q9NW07 568 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 GRID1Q9ULK0 1009 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 INVSQ9Y283 1065 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 IGHV1OR15-9A0A0B4J2B8 117 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 CDK14O94921 469 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 ZWINTO95229 277 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 ASMTLO95671 621 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 CCDC166P0CW27 439 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 AOC1P19801 751 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 IGFALSP35858 605 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 SKIV2L2P42285 1042 aaKnown RBP17.32■□□□□ 0.36
SREK1-216ENST00000612404 CDK3Q00526 305 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 CSHL1Q14406 222 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 DOK6Q6PKX4 331 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 PAQR3Q6TCH7 311 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 TMEM207Q6UWW9 146 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 CLEC14AQ86T13 490 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 CENPLQ8N0S6 344 aaPredicted RBP17.32■□□□□ 0.36
SREK1-216ENST00000612404 RASGEF1AQ8N9B8 481 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 FAM111AQ96PZ2 611 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 SLC30A3Q99726 388 aa17.32■□□□□ 0.36
SREK1-216ENST00000612404 LGR4Q9BXB1 951 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms