RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 GPRC6AQ5T6X5 926 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PIP5KL1Q5T9C9 394 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 NAIF1Q69YI7 327 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TXNDC11Q6PKC3 985 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 Q6ZVL8 140 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 NEK10Q6ZWH5 1172 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SFTPA1Q8IWL2 248 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CHCHD4Q8N4Q1 142 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CXorf40AQ8TE69 158 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 AP2M1Q96CW1 435 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DCUN1D1Q96GG9 259 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FAM126AQ9BYI3 521 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ABCG8Q9H221 673 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CACNA2D2Q9NY47 1150 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 RAP2CQ9Y3L5 183 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ATG2BQ96BY7 2078 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 A0A0U1RQS6 177 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 KLHL33A6NCF5 533 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 A8MT66 165 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ZBTB14O43829 449 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FTH1P02794 183 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SRFP11831 508 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 BMP1P13497 986 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 C6P13671 934 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ATP1B2P14415 290 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 IMPDH1P20839 514 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 DRD3P35462 400 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ETV3P41162 512 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GLRBP48167 497 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PSMD8P48556 350 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 IRX4P78413 519 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ACOX1Q15067 660 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PLEKHS1Q5SXH7 462 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 AGBL4Q5VU57 503 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FAM91A1Q658Y4 838 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NEK5Q6P3R8 708 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TTC23LQ6PF05 361 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 USP30Q70CQ3 517 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RAB44Q7Z6P3 723 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 KBTBD6Q86V97 674 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PHYKPLQ8IUZ5 450 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MMAAQ8IVH4 418 aaKnown RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ZBTB2Q8N680 514 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TXNDC5Q8NBS9 432 aaKnown RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GIMAP7Q8NHV1 300 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ASB12Q8WXK4 309 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 EZH1Q92800 747 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HLA-CQ95604 372 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GLYATL1Q969I3 302 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PTERQ96BW5 349 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NUS1Q96E22 293 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FAR2Q96K12 515 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ZNF514Q96K75 400 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ACOX2Q99424 681 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SORT1Q99523 831 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GATA5Q9BWX5 397 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 WWP1Q9H0M0 922 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RABEP2Q9H5N1 569 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RDH14Q9HBH5 336 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 EML4Q9HC35 981 aaKnown RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FBRSL1Q9HCM7 1045 aaKnown RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NUDT4Q9NZJ9 180 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CPSF2Q9P2I0 782 aaKnown RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 VTI1BQ9UEU0 232 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FZD4Q9ULV1 537 aa12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FNDC3AQ9Y2H6 1198 aaKnown RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ZFC3H1O60293 1989 aaKnown RBP12.14□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PLXND1Q9Y4D7 1925 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NUMA1Q14980 2115 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 A8MX80 341 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GPR89AB7ZAQ6 455 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MAN2B1O00754 1011 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NUAK1O60285 661 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 DNAJC6O75061 913 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 KIAA0754O94854 1291 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HSPA4LO95757 839 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ENO2P09104 434 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GPR89BP0CG08 455 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MPC1LP0DKB6 136 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 UGT1A6P19224 532 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MSH3P20585 1137 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 UGT1A1P22309 533 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 UGT1A4P22310 534 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SP100P23497 879 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 UGT1A3P35503 534 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 UGT1A5P35504 534 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SOX9P48436 509 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 COPAP53621 1224 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RPS14P62263 151 aaKnown RBP12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HERVK_113P63132 956 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 B4GALNT1Q00973 533 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CNTN1Q12860 1018 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SP140Q13342 867 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SETDB1Q15047 1291 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MAP7D1Q3KQU3 841 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 BCL7AQ4VC05 210 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 EOGTQ5NDL2 527 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PRPF38BQ5VTL8 546 aaKnown RBP12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CES4AQ5XG92 561 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms