RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 A0A1W2PPM1 405 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 HCN1O60741 890 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ATG13O75143 517 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 GPD2P43304 727 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 CXCR3P49682 368 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 SMU1Q2TAY7 513 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 USP30Q70CQ3 517 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 UBE2R2Q712K3 238 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ZZZ3Q8IYH5 903 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 AGO3Q9H9G7 860 aaKnown RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 MED11Q9P086 117 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 S100A2P29034 98 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 LARS2Q15031 903 aaKnown RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ZYG11AQ6WRX3 759 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 PHYKPLQ8IUZ5 450 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 C11orf65Q8NCR3 313 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 MYO19Q96H55 970 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TOR3AQ9H497 397 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TECPR2O15040 1411 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 KLF10Q13118 480 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 KCTD8Q6ZWB6 473 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TMPRSS11BQ86T26 416 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 C12orf29Q8N999 325 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 OR10G6Q8NH81 332 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 CXorf21Q9HAI6 301 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 GRHL1Q9NZI5 618 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 PDE10AQ9Y233 779 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 PRLP01236 227 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ERBB2P04626 1255 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 DBIP07108 87 aaKnown RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ICAM3P32942 547 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF234Q14588 700 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 OR5T3Q8NGG3 340 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 RASSF5Q8WWW0 418 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TSSK3Q96PN8 268 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 KCNS3Q9BQ31 491 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ANKRA2Q9H9E1 313 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 KCNA5P22460 613 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 EIF2S3LQ2VIR3 472 aaKnown RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 RANBP3LQ86VV4 465 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 GPALPP1Q8IXQ4 340 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF548Q8NEK5 533 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 MTMR9Q96QG7 549 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 COPS8Q99627 209 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 DHX33Q9H6R0 707 aaKnown RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TBC1D17Q9HA65 648 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 PCDHB9Q9Y5E1 797 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 PDHXO00330 501 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 PAGE1O75459 146 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 GPIP06744 558 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 GSTT2BP0CG30 244 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 MPP1Q00013 466 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 RNASEH2BQ5TBB1 312 aaKnown RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 KCNK18Q7Z418 384 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ECHDC2Q86YB7 292 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 UFD1Q92890 307 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 AIF1LQ9BQI0 150 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 DENND2DQ9H6A0 471 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 WDR55Q9H6Y2 383 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TAS2R7Q9NYW3 318 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 GNALP38405 381 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 RGS8P57771 180 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 BLMHQ13867 455 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 DCST1Q5T197 706 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF567Q8N184 647 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 C7orf26Q96N11 449 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 PWWP2AQ96N64 755 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 CNPPD1Q9BV87 410 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 DUSP16Q9BY84 665 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF639Q9UID6 485 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 IL1R1P14778 569 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 PPP3R1P63098 170 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 GLYATQ6IB77 296 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 METTL21EPA6NDL7 271 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 PLOD2O00469 737 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 EPHB6O15197 1021 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 CCNB2O95067 398 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TPSB2P20231 275 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 MRPS6P82932 125 aaKnown RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 MXD1Q05195 221 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 SIM2Q14190 667 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TPSAB1Q15661 275 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 CNPY1Q3B7I2 92 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 SLC9A9Q8IVB4 645 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 KIAA0319LQ8IZA0 1049 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TMEM161BQ8NDZ6 487 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 UROC1Q96N76 676 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 ADAM2Q99965 735 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 GBA2Q9HCG7 927 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-217ENST00000602723 TRIM17Q9Y577 477 aa9.53□□□□□ -0.88
CSMD1-217ENST00000602723 YDJCA8MPS7 323 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 KCNU1A8MYU2 1149 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 SCNN1GP51170 649 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 ARPC4P59998 168 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 RPL19P84098 196 aaKnown RBP9.52□□□□□ -0.88
CSMD1-217ENST00000602723 BNIP1Q12981 228 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 NBPF12Q5TAG4 269 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-217ENST00000602723 PIGZQ86VD9 579 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 OR2L3Q8NG85 312 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms