RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 SEC14L1Q92503 715 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 ZNF653Q96CK0 615 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 TGM7Q96PF1 710 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 FCRL4Q96PJ5 515 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 RAB33BQ9H082 229 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 TRIM39Q9HCM9 518 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 MLXIPLQ9NP71 852 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 LHX9Q9NQ69 397 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 KLC4Q9NSK0 619 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 AIPL1Q9NZN9 384 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 SCHIP1Q9P0W5 487 aaPredicted RBP13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 ZNF624Q9P2J8 865 aaPredicted RBP13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 PCDHGA9Q9Y5G4 932 aaKnown RBP13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 MYO9AB2RTY4 2548 aa13.17□□□□□ -0.3
SUPT5H-220ENST00000601978 CACNA1DQ01668 2161 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 ANKRD66B4E2M5 251 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 NELFEP18615 380 aaKnown RBP13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 LEPRP48357 1165 aaKnown RBP13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 SEPHS1P49903 392 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 SLC25A11Q02978 314 aaKnown RBP13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 NIPAL4Q0D2K0 466 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 QPCTQ16769 361 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 ABRAXAS1Q6UWZ7 409 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 WASH2PQ6VEQ5 465 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 PPP1R3BQ86XI6 285 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 CNGA4Q8IV77 575 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 RBM12BQ8IXT5 1001 aaKnown RBP13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 LPCAT1Q8NF37 534 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 CT55Q8WUE5 264 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 THAP4Q8WY91 577 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 ZDHHC12Q96GR4 267 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 DNAJC7Q99615 494 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 MLPHQ9BV36 600 aaPredicted RBP13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 GPR87Q9BY21 358 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 BRD8Q9H0E9 1235 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 ISCUQ9H1K1 167 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 WASH6PQ9NQA3 447 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 ABHD10Q9NUJ1 306 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 POT1Q9NUX5 634 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 RBM22Q9NW64 420 aaKnown RBP eCLIP13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 SLC23A2Q9UGH3 650 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 LNPEPQ9UIQ6 1025 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 MAP4K5Q9Y4K4 846 aa13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 ZNF106Q9H2Y7 1883 aaKnown RBP13.16□□□□□ -0.3
SUPT5H-220ENST00000601978 SHANK1Q9Y566 2161 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 AKR1B15C9JRZ8 316 aaPredicted RBP13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 KMOO15229 486 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 RASSF9O75901 435 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 SLC25A14O95258 325 aaPredicted RBP13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 ZNF7P17097 686 aaPredicted RBP13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 CAPZBP47756 277 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 DCDC1P59894 354 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 IFI16Q16666 785 aaKnown RBP13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 UGT8Q16880 541 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 TDRD12Q587J7 1177 aaKnown RBP13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 CCDC122Q5T0U0 273 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 AGAP9Q5VTM2 703 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 CACHD1Q5VU97 1274 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 PAPD7Q5XG87 772 aaKnown RBP13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 PDPK2PQ6A1A2 396 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 ADGRG6Q86SQ4 1221 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 BPHLQ86WA6 291 aaPredicted RBP13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 TRIM48Q8IWZ4 208 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 EID2BQ96D98 161 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 TIMM29Q9BSF4 260 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 ZSCAN5AQ9BUG6 496 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 TRIM55Q9BYV6 548 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 OR2AG1Q9H205 316 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 OSGEPL1Q9H4B0 414 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 ACTL8Q9H568 366 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 PDE7BQ9NP56 450 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 SLC40A1Q9NP59 571 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 NFKBIL1Q9UBC1 381 aaPredicted RBP13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 MYO1AQ9UBC5 1043 aa13.15□□□□□ -0.3
SUPT5H-220ENST00000601978 MED13Q9UHV7 2174 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 SPENQ96T58 3664 aaKnown RBP13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 GOLGA6L6A8MZA4 724 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 KIF1CO43896 1103 aaKnown RBP13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 MFSD11O43934 449 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 DNAJB5O75953 348 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 MTA2O94776 668 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 SORBS2O94875 1100 aaKnown RBP13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 DDAH2O95865 285 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 SKILP12757 684 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 BRAFP15056 766 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 PTPN4P29074 926 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 ARSEP51690 589 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 PGDP52209 483 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 KLHL30Q0D2K2 578 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 MMRN1Q13201 1228 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 LAMB3Q13751 1172 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 ZNF569Q5MCW4 686 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 NCBP2-AS2Q69YL0 99 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 LRRTM4Q86VH4 590 aa13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.14□□□□□ -0.31
SUPT5H-220ENST00000601978 TC2NQ8N9U0 490 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms