RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	PURA	Q00577	322 aa	Known RBP	11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CLC	Q05315	142 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	NME3	Q13232	169 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CTBP1	Q13363	440 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	GEN1	Q17RS7	908 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PROX2	Q3B8N5	592 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ATP6AP1L	Q52LC2	224 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	UBE2U	Q5VVX9	321 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SYCE2	Q6PIF2	218 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CATSPER4	Q7RTX7	472 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SNX20	Q7Z614	316 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	STK32C	Q86UX6	486 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	DENND6A	Q8IWF6	608 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TMBIM1	Q969X1	311 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TADA1	Q96BN2	335 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	IMP4	Q96G21	291 aa	Known RBP	11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PPP1R36	Q96LQ0	422 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	FICD	Q9BVA6	458 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	KATNAL1	Q9BW62	490 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	YIPF2	Q9BWQ6	316 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	NTN4	Q9HB63	628 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CSNK1G1	Q9HCP0	422 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	MID1IP1	Q9NPA3	183 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PLCXD1	Q9NUJ7	323 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TAS2R13	Q9NYV9	303 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	OSGIN1	Q9UJX0	560 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CDH9	Q9ULB4	789 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	AKT3	Q9Y243	479 aa		11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	EIF3L	Q9Y262	564 aa	Known RBP	11.64	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ZBBX	A8MT70	800 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236		J3QRK9	145 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	USP12	O75317	370 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TRIM3	O75382	744 aa	Predicted RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	RAD17	O75943	681 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	LRIG2	O94898	1065 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	NADK	O95544	446 aa	Predicted RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	GLP2R	O95838	553 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	S1PR4	O95977	384 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	IGLV3-25	P01717	112 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	KRT8	P05787	483 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TFPT	P0C1Z6	253 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	INSRR	P14616	1297 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ZNF37A	P17032	561 aa	Predicted RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SAT1	P21673	171 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	YWHAQ	P27348	245 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ADORA2B	P29275	332 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	MTHFR	P42898	656 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	MAGEA2	P43356	314 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PXN	P49023	591 aa	Predicted RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ALDH9A1	P49189	494 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CLCN3	P51790	818 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SH3BP2	P78314	561 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SLC35A2	P78381	396 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	RAD51	Q06609	339 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PPP1R3A	Q16821	1122 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TYSND1	Q2T9J0	566 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ZNF404	Q494X3	552 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	MANEAL	Q5VSG8	457 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SHQ1	Q6PI26	577 aa	Known RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SLC2A7	Q6PXP3	512 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CLEC20A	Q6ZU45	233 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	LRRC8D	Q7L1W4	858 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	HORMAD1	Q86X24	394 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PLD3	Q8IV08	490 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	FBXO39	Q8N4B4	442 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ARL10	Q8N8L6	244 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ACVR1C	Q8NER5	493 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ANGPTL6	Q8NI99	470 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	HPS1	Q92902	700 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	FBXL8	Q96CD0	374 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TMCO6	Q96DC7	493 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	CCDC97	Q96F63	343 aa	Predicted RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SMARCD1	Q96GM5	515 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PDLIM5	Q96HC4	596 aa	Known RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ATOH8	Q96SQ7	321 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TPK1	Q9H3S4	243 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	DSN1	Q9H410	356 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TOR3A	Q9H497	397 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	RGS18	Q9NS28	235 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	DDIT4	Q9NX09	232 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	DSE	Q9UL01	958 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	INTS6	Q9UL03	887 aa	Known RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SAMD4A	Q9UPU9	718 aa	Known RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	TRAPPC4	Q9Y296	219 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PCDHGA8	Q9Y5G5	932 aa		11.63	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	FAM220BP	B1ANY3	271 aa		11.62	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	UBFD1	O14562	309 aa	Known RBP	11.62	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	GNGT2	O14610	69 aa		11.62	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	PRMT5	O14744	637 aa	Predicted RBP	11.62	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	SNPH	O15079	494 aa		11.62	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	GSTA4	O15217	222 aa		11.62	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	KMO	O15229	486 aa		11.62	□□□□□ -0.55
U2AF1L4-221	ENST00000601236	RGS10	O43665	173 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms