RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 GPN2Q9H9Y4 310 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-204ENST00000601038 APMAPQ9HDC9 416 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 ZNF624Q9P2J8 865 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-204ENST00000601038 POLR1CO15160 346 aaPredicted RBP16.73■□□□□ 0.27
SCAF1-204ENST00000601038 MTX2O75431 263 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 STK17BO94768 372 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 UBXN7O94888 489 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 TNNT1P13805 278 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 COMTP21964 271 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 HMGCLP35914 325 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 CDKN2BP42772 138 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 NOP2P46087 812 aaKnown RBP16.73■□□□□ 0.27
SCAF1-204ENST00000601038 ABHD18Q0P651 414 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 TAZQ16635 292 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 ABRAXAS1Q6UWZ7 409 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 WASH2PQ6VEQ5 465 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 TIPARPQ7Z3E1 657 aaKnown RBP16.73■□□□□ 0.27
SCAF1-204ENST00000601038 ZNF547Q8IVP9 402 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 TRIM48Q8IWZ4 208 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 TFB1MQ8WVM0 346 aaKnown RBP16.73■□□□□ 0.27
SCAF1-204ENST00000601038 KIAA1143Q96AT1 154 aaPredicted RBP16.73■□□□□ 0.27
SCAF1-204ENST00000601038 C9orf72Q96LT7 481 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 TRABDQ9H4I3 376 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 WASH6PQ9NQA3 447 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 UBP1Q9NZI7 540 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 OGFRQ9NZT2 677 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 SAE1Q9UBE0 346 aaPredicted RBP16.73■□□□□ 0.27
SCAF1-204ENST00000601038 FAM153AQ9UHL3 310 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 TMPRSS11EQ9UL52 423 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 DNAJC16Q9Y2G8 782 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 HYOU1Q9Y4L1 999 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 SPO11Q9Y5K1 396 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 SLC30A1Q9Y6M5 507 aa16.73■□□□□ 0.27
SCAF1-204ENST00000601038 LOC285095A0A1B0GVY8 99 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 PDZK1P1A8MUH7 402 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 TERTO14746 1132 aaKnown RBP16.72■□□□□ 0.27
SCAF1-204ENST00000601038 TOX3O15405 576 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-204ENST00000601038 MTSS1O43312 755 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 SPOPO43791 374 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 CST8O60676 142 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 EPOP01588 193 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 BRAFP15056 766 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 AMD1P17707 334 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 IDSP22304 550 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 CD68P34810 354 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-204ENST00000601038 CSRP3P50461 194 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 GFERP55789 205 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 NFKB2Q00653 900 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 TMEM115Q12893 351 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-204ENST00000601038 PLA2G4EQ3MJ16 856 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 ATP13A5Q4VNC0 1218 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 KHDC1Q4VXA5 237 aaKnown RBP16.72■□□□□ 0.27
SCAF1-204ENST00000601038 AGAP9Q5VTM2 703 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 ZDHHC20Q5W0Z9 365 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 DTX3LQ8TDB6 740 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 BRSK1Q8TDC3 778 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 BPIFA1Q9NP55 256 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 POT1Q9NUX5 634 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 SIDT1Q9NXL6 827 aaKnown RBP16.72■□□□□ 0.27
SCAF1-204ENST00000601038 IL17BQ9UHF5 180 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 TUBD1Q9UJT1 453 aa16.72■□□□□ 0.27
SCAF1-204ENST00000601038 FLNBO75369 2602 aaKnown RBP16.72■□□□□ 0.27
SCAF1-204ENST00000601038 LOC101059948A0A1B0GTJ6 334 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 NKX2-8O15522 239 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 PSTPIP1O43586 416 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 DLGAP3O95886 979 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 PECAM1P16284 738 aaPredicted RBP16.71■□□□□ 0.27
SCAF1-204ENST00000601038 TYRP1P17643 537 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 RPL10P27635 214 aaKnown RBP16.71■□□□□ 0.27
SCAF1-204ENST00000601038 CCR10P46092 362 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 POLE2P56282 527 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 WNT3AP56704 352 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 WASHC5Q12768 1159 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 MAP7Q14244 749 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 SEPT7Q16181 437 aaKnown RBP16.71■□□□□ 0.27
SCAF1-204ENST00000601038 SKOR2Q2VWA4 1001 aaPredicted RBP16.71■□□□□ 0.27
SCAF1-204ENST00000601038 KDELC1Q6UW63 502 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 SPOCD1Q6ZMY3 1216 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 C11orf96Q7Z7L8 435 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 CNGA4Q8IV77 575 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 RBM12BQ8IXT5 1001 aaKnown RBP16.71■□□□□ 0.27
SCAF1-204ENST00000601038 P3H4Q92791 437 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 VAT1Q99536 393 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 SLC40A1Q9NP59 571 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 IL26Q9NPH9 171 aa16.71■□□□□ 0.27
SCAF1-204ENST00000601038 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCAF1-204ENST00000601038 SPTA1P02549 2419 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 KCNJ13O60928 360 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 VCLP18206 1134 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 NFKB1P19838 968 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
SCAF1-204ENST00000601038 HADHBP55084 474 aaKnown RBP16.7■□□□□ 0.26
SCAF1-204ENST00000601038 FOXM1Q08050 763 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 KCNAB2Q13303 367 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 GTF2H3Q13889 308 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 TFDP3Q5H9I0 405 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 SIRPB2Q5JXA9 342 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 KAZNQ674X7 775 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 TRAPPC5Q8IUR0 188 aa16.7■□□□□ 0.26
SCAF1-204ENST00000601038 UNC5BQ8IZJ1 945 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms