RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 GPR27Q9NS67 375 aa20.21■□□□□ 0.83
PNKP-215ENST00000600910 FETUBQ9UGM5 382 aa20.21■□□□□ 0.83
PNKP-215ENST00000600910 ZNF8P17098 575 aaPredicted RBP20.2■□□□□ 0.82
PNKP-215ENST00000600910 KELP23276 732 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 FMO4P31512 558 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 AFF3P51826 1226 aaKnown RBP20.2■□□□□ 0.82
PNKP-215ENST00000600910 ADARP55265 1226 aaKnown RBP20.2■□□□□ 0.82
PNKP-215ENST00000600910 GRTP1Q5TC63 336 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 ENPP7Q6UWV6 458 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 OR56A4Q8NGH8 313 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 DCAKDQ8WVC6 231 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 PIGKQ92643 395 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 SGF29Q96ES7 293 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 WDR92Q96MX6 357 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 BIRC8Q96P09 236 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 DHRS4Q9BTZ2 278 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 RHOJQ9H4E5 214 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 SLC17A4Q9Y2C5 497 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 NFS1Q9Y697 457 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 OR2AG2A6NM03 316 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 CEACAM5P06731 702 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 IVLP07476 585 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 GNSP15586 552 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 RPS3P23396 243 aaKnown RBP eCLIP20.2■□□□□ 0.82
PNKP-215ENST00000600910 CSNK1EP49674 416 aaKnown RBP20.2■□□□□ 0.82
PNKP-215ENST00000600910 OVGP1Q12889 678 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 GTF2H3Q13889 308 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 PTK2BQ14289 1009 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 MACC1Q6ZN28 852 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 SYT12Q8IV01 421 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 EPS8L3Q8TE67 593 aaKnown RBP20.2■□□□□ 0.82
PNKP-215ENST00000600910 ZIM3Q96PE6 472 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 FGF22Q9HCT0 170 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 SLC24A2Q9UI40 661 aa20.2■□□□□ 0.82
PNKP-215ENST00000600910 SPTY2D1-AS1A0A0U1RR47 76 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 A0A1B0GTW7 788 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 SMIM23A6NLE4 172 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 TLR4O00206 839 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 ESR1P03372 595 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 SLCO1A2P46721 670 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 CTSCP53634 463 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 CTSL3PQ5NE16 218 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 KCTD16Q68DU8 428 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 ZNF549Q6P9A3 640 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 DCP2Q8IU60 420 aaKnown RBP20.19■□□□□ 0.82
PNKP-215ENST00000600910 VPS39Q96JC1 886 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 NDNQ99608 321 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 CCDC68Q9H2F9 335 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 MRPL40Q9NQ50 206 aaKnown RBP20.19■□□□□ 0.82
PNKP-215ENST00000600910 SUSD2Q9UGT4 822 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 MOSPD1Q9UJG1 213 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 GNPTGQ9UJJ9 305 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 ZNF180Q9UJW8 692 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 PCDHB1Q9Y5F3 818 aa20.19■□□□□ 0.82
PNKP-215ENST00000600910 PRR5-ARHGAP8B1AHC4 643 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 GPR89AB7ZAQ6 455 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 CHUKO15111 745 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 VILLO15195 856 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 SGTAO43765 313 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 NUAK1O60285 661 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 DNAJC6O75061 913 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 TCEA3O75764 348 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 FUCA1P04066 466 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 GPR89BP0CG08 455 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 PKMP14618 531 aaKnown RBP20.18■□□□□ 0.82
PNKP-215ENST00000600910 SPRP35270 261 aaPredicted RBP20.18■□□□□ 0.82
PNKP-215ENST00000600910 LIMK2P53671 638 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 RBM20Q5T481 1227 aaKnown RBP20.18■□□□□ 0.82
PNKP-215ENST00000600910 PEAR1Q5VY43 1037 aaPredicted RBP20.18■□□□□ 0.82
PNKP-215ENST00000600910 PTRHD1Q6GMV3 140 aaKnown RBP20.18■□□□□ 0.82
PNKP-215ENST00000600910 TMEM220Q6QAJ8 160 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 ADGRD1Q6QNK2 874 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 HDXQ7Z353 690 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 TRAPPC5Q8IUR0 188 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 GPATCH11Q8N954 259 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 PPCSQ9HAB8 311 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 CTNNAL1Q9UBT7 734 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 KLQ9UEF7 1012 aa20.18■□□□□ 0.82
PNKP-215ENST00000600910 CORO1CQ9ULV4 474 aaPredicted RBP20.18■□□□□ 0.82
PNKP-215ENST00000600910 PCYT1BQ9Y5K3 369 aaPredicted RBP20.18■□□□□ 0.82
PNKP-215ENST00000600910 PRSS38A1L453 326 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 MAGEC1O60732 1142 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 AP2A2O94973 939 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 ITGA2BP08514 1039 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 OR56A5P0C7T3 313 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 FZD2Q14332 565 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 TEAD4Q15561 434 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 SPATS2Q86XZ4 545 aaKnown RBP20.17■□□□□ 0.82
PNKP-215ENST00000600910 BEND7Q8N7W2 519 aaPredicted RBP20.17■□□□□ 0.82
PNKP-215ENST00000600910 ACVR1CQ8NER5 493 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 OR1E3Q8WZA6 343 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 TSACCQ96A04 125 aaPredicted RBP20.17■□□□□ 0.82
PNKP-215ENST00000600910 SKA1Q96BD8 255 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 PDXPQ96GD0 296 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 AARSD1Q9BTE6 412 aaKnown RBP20.17■□□□□ 0.82
PNKP-215ENST00000600910 ROPN1BQ9BZX4 212 aaPredicted RBP20.17■□□□□ 0.82
PNKP-215ENST00000600910 ROPN1Q9HAT0 212 aaPredicted RBP20.17■□□□□ 0.82
PNKP-215ENST00000600910 CYP4F12Q9HCS2 524 aa20.17■□□□□ 0.82
PNKP-215ENST00000600910 PSMC3IPQ9P2W1 217 aaPredicted RBP20.17■□□□□ 0.82
PNKP-215ENST00000600910 RAB23Q9ULC3 237 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms