RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 FASTKD1Q53R41 847 aaKnown RBP19.1■□□□□ 0.65
UPF1-209ENST00000600310 LYPLAL1Q5VWZ2 237 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 CERS6Q6ZMG9 384 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 PIP4P1Q86T03 277 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 CCNJLQ8IV13 435 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 IGDCC3Q8IVU1 814 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 NAXDQ8IW45 347 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 GPBAR1Q8TDU6 330 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 DCUN1D1Q96GG9 259 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 EPB41L5Q9HCM4 733 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 CATSPERZQ9NTU4 200 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 BTBD3Q9Y2F9 522 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 TEX264Q9Y6I9 313 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 FAM169AQ9Y6X4 670 aa19.1■□□□□ 0.65
UPF1-209ENST00000600310 ESYT3A0FGR9 886 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 CFAP99D6REC4 459 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 EIF3HO15372 352 aaKnown RBP eCLIP19.09■□□□□ 0.65
UPF1-209ENST00000600310 YY2O15391 372 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 TTC4O95801 387 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 POLBP06746 335 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 ANXA6P08133 673 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 RALBP11234 206 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 ELK3P41970 407 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 B4GALNT1Q00973 533 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 ILF3Q12906 894 aaKnown RBP eCLIP19.09■□□□□ 0.65
UPF1-209ENST00000600310 PDIA2Q13087 525 aaKnown RBP19.09■□□□□ 0.65
UPF1-209ENST00000600310 LRP8Q14114 963 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 ITIH4Q14624 930 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 LVRNQ6Q4G3 990 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 CENPUQ71F23 418 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 LRRTM4Q86VH4 590 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 GKN2Q86XP6 184 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 ZNF547Q8IVP9 402 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 EID2Q8N6I1 236 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 OR4C6Q8NH72 309 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 CCL4L1Q8NHW4 92 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 FBXO25Q8TCJ0 367 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 SETD7Q8WTS6 366 aaKnown RBP19.09■□□□□ 0.65
UPF1-209ENST00000600310 TTC1Q99614 292 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 WDR83Q9BRX9 315 aaKnown RBP19.09■□□□□ 0.65
UPF1-209ENST00000600310 DUSP23Q9BVJ7 150 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 GSDMCQ9BYG8 508 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 FAM114A2Q9NRY5 505 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 NLGN3Q9NZ94 848 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 PRKAB1Q9Y478 270 aa19.09■□□□□ 0.65
UPF1-209ENST00000600310 TRIM38O00635 465 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 KMOO15229 486 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 CD3EAPO15446 510 aaKnown RBP19.08■□□□□ 0.64
UPF1-209ENST00000600310 FFAR2O15552 330 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 CBFA2T3O75081 653 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 ALPPL2P10696 532 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 CSRP1P21291 193 aaKnown RBP19.08■□□□□ 0.64
UPF1-209ENST00000600310 CTSCP53634 463 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 CTBSQ01459 385 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 SEMA3AQ14563 771 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 TCEA2Q15560 299 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 AARS2Q5JTZ9 985 aaKnown RBP19.08■□□□□ 0.64
UPF1-209ENST00000600310 SPANXN3Q5MJ09 141 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 HP1BP3Q5SSJ5 553 aaPredicted RBP19.08■□□□□ 0.64
UPF1-209ENST00000600310 TMEM220Q6QAJ8 160 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 CRTC3Q6UUV7 619 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 TAF8Q7Z7C8 310 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 NRROSQ86YC3 692 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.08■□□□□ 0.64
UPF1-209ENST00000600310 LRRN4CLQ8ND94 238 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 RHBDD1Q8TEB9 315 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 CCDC97Q96F63 343 aaPredicted RBP19.08■□□□□ 0.64
UPF1-209ENST00000600310 ZNF514Q96K75 400 aaPredicted RBP19.08■□□□□ 0.64
UPF1-209ENST00000600310 RTKNQ9BST9 563 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 FAM129AQ9BZQ8 928 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 FOXP3Q9BZS1 431 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 PHACTR1Q9C0D0 580 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 MARCH4Q9P2E8 410 aaPredicted RBP19.08■□□□□ 0.64
UPF1-209ENST00000600310 PCOLCE2Q9UKZ9 415 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 GPR34Q9UPC5 381 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 DOLKQ9UPQ8 538 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 CHMP2BQ9UQN3 213 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 PLEKHM1Q9Y4G2 1056 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 ST14Q9Y5Y6 855 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 ASCC3Q8N3C0 2202 aaKnown RBP19.08■□□□□ 0.64
UPF1-209ENST00000600310 LRP4O75096 1905 aa19.08■□□□□ 0.64
UPF1-209ENST00000600310 SGTAO43765 313 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 ATP1B2P14415 290 aaPredicted RBP19.07■□□□□ 0.64
UPF1-209ENST00000600310 AK4P27144 223 aaPredicted RBP19.07■□□□□ 0.64
UPF1-209ENST00000600310 PPARGP37231 505 aaPredicted RBP19.07■□□□□ 0.64
UPF1-209ENST00000600310 CRYMQ14894 314 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 LONRF1Q17RB8 773 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 DEFB133Q30KQ1 61 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 BCL7AQ4VC05 210 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 PACS1Q6VY07 963 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 CHST15Q7LFX5 561 aaPredicted RBP19.07■□□□□ 0.64
UPF1-209ENST00000600310 TRAPPC5Q8IUR0 188 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 PNPLA1Q8N8W4 532 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 GPR150Q8NGU9 434 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 BAHD1Q8TBE0 780 aaPredicted RBP19.07■□□□□ 0.64
UPF1-209ENST00000600310 SCG3Q8WXD2 468 aaKnown RBP19.07■□□□□ 0.64
UPF1-209ENST00000600310 SGF29Q96ES7 293 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 CAMK1GQ96NX5 476 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 BOCQ9BWV1 1114 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 PLAC1Q9HBJ0 212 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms