RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PNMA8BQ9ULN7 279 aaPredicted RBP18.66■□□□□ 0.58
CCDC9-205ENST00000600117 SNX11Q9Y5W9 270 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 SLC30A1Q9Y6M5 507 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 FAM169AQ9Y6X4 670 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 LRP4O75096 1905 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 VAPBO95292 243 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 CACNG1Q06432 222 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 GRIK2Q13002 908 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 EIF2B5Q13144 721 aaKnown RBP18.65■□□□□ 0.58
CCDC9-205ENST00000600117 CRYMQ14894 314 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 GPR33Q49SQ1 333 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 KHDC1Q4VXA5 237 aaKnown RBP18.65■□□□□ 0.58
CCDC9-205ENST00000600117 ZRANB3Q5FWF4 1079 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 GPRC6AQ5T6X5 926 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 UNC5AQ6ZN44 842 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 PHYKPLQ8IUZ5 450 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 CCNJLQ8IV13 435 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 PNPLA1Q8N8W4 532 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 DDHD1Q8NEL9 900 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 OR6P1Q8NGX9 317 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 MDM1Q8TC05 714 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 WDR92Q96MX6 357 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 FGF22Q9HCT0 170 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 ARFGAP3Q9NP61 516 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 ZC3H7BQ9UGR2 993 aaKnown RBP18.65■□□□□ 0.58
CCDC9-205ENST00000600117 NFU1Q9UMS0 254 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 APOBEC2Q9Y235 224 aaKnown RBP18.65■□□□□ 0.58
CCDC9-205ENST00000600117 SLC17A4Q9Y2C5 497 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 RAXQ9Y2V3 346 aa18.65■□□□□ 0.58
CCDC9-205ENST00000600117 SLC25A14O95258 325 aaPredicted RBP18.64■□□□□ 0.57
CCDC9-205ENST00000600117 TTC4O95801 387 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 CEACAM5P06731 702 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 POLBP06746 335 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 PAMP19021 973 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 PTK2BQ14289 1009 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 SEMA3AQ14563 771 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 SPANXN3Q5MJ09 141 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 ZNF648Q5T619 568 aaPredicted RBP18.64■□□□□ 0.57
CCDC9-205ENST00000600117 CCDC25Q86WR0 208 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 NAXDQ8IW45 347 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 ZBED8Q8IZ13 594 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 NXPE1Q8N323 547 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.64■□□□□ 0.57
CCDC9-205ENST00000600117 OR4L1Q8NH43 312 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 OR1E3Q8WZA6 343 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 ULK4Q96C45 1275 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 FMO2Q99518 471 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 CAAP1Q9H8G2 361 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 ERVMER34-1Q9H9K5 563 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 MARCH4Q9P2E8 410 aaPredicted RBP18.64■□□□□ 0.57
CCDC9-205ENST00000600117 DKK4Q9UBT3 224 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 MTRF1LQ9UGC7 380 aaKnown RBP18.64■□□□□ 0.57
CCDC9-205ENST00000600117 CRLS1Q9UJA2 301 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 TMEM98Q9Y2Y6 226 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 TMEM131Q92545 1883 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 ZNF462Q96JM2 2506 aa18.64■□□□□ 0.57
CCDC9-205ENST00000600117 MTX2O75431 263 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 FUCA1P04066 466 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 KELP23276 732 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 HTR1BP28222 390 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 TNFRSF8P28908 595 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 POLD2P49005 469 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 DBN1Q16643 649 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 ALG11Q2TAA5 492 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 LDLRAP1Q5SW96 308 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 ENPP7Q6UWV6 458 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 ADGRG6Q86SQ4 1221 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 PARGQ86W56 976 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 SERPINA9Q86WD7 417 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 UNC5BQ8IZJ1 945 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 EIF1ADQ8N9N8 165 aaKnown RBP18.63■□□□□ 0.57
CCDC9-205ENST00000600117 OR56A4Q8NGH8 313 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 CCDC97Q96F63 343 aaPredicted RBP18.63■□□□□ 0.57
CCDC9-205ENST00000600117 CFAP36Q96G28 342 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 SCARF2Q96GP6 870 aaPredicted RBP18.63■□□□□ 0.57
CCDC9-205ENST00000600117 ZDHHC5Q9C0B5 715 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 TRIM39Q9HCM9 518 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 CATSPERZQ9NTU4 200 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 IL1RAPL1Q9NZN1 696 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 VPS18Q9P253 973 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC9-205ENST00000600117 KLF15Q9UIH9 416 aa18.63■□□□□ 0.57
CCDC9-205ENST00000600117 V9GYY5 206 aaPredicted RBP18.63■□□□□ 0.57
CCDC9-205ENST00000600117 KNTC1P50748 2209 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 CABIN1Q9Y6J0 2220 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 IGLV3-16A0A075B6K0 115 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 GOLGA8KD6RF30 607 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 GOLGA8TH3BQL2 631 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 TNFRSF10CO14798 259 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 MYBL2P10244 700 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 ACRV1P26436 265 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 MAGEA4P43358 317 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 B4GALNT1Q00973 533 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 FRG1Q14331 258 aaKnown RBP18.62■□□□□ 0.57
CCDC9-205ENST00000600117 SHBQ15464 509 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 SMAD1Q15797 465 aaKnown RBP18.62■□□□□ 0.57
CCDC9-205ENST00000600117 LONRF1Q17RB8 773 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 PRAMEF14Q5SWL7 426 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 DOK6Q6PKX4 331 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 TAS2R42Q7RTR8 314 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms