RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	OR56A4	Q8NGH8	313 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	BTN2A2	Q8WVV5	523 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	PDXP	Q96GD0	296 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	EPB41L4B	Q9H329	900 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	FAM96A	Q9H5X1	160 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	TMEM9B	Q9NQ34	198 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	KL	Q9UEF7	1012 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	UGT1A9	O60656	530 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	NME1	P15531	152 aa	Known RBP	21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	UGT1A6	P19224	532 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	UGT1A1	P22309	533 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	UGT1A4	P22310	534 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	UGT1A3	P35503	534 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	UGT1A5	P35504	534 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	CCT8	P50990	548 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	IL9R	Q01113	521 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	ALG11	Q2TAA5	492 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	KBTBD12	Q3ZCT8	623 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	TEDDM1	Q5T9Z0	273 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	ZNF470	Q6ECI4	717 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	CERS6	Q6ZMG9	384 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	PHYKPL	Q8IUZ5	450 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	SCG3	Q8WXD2	468 aa	Known RBP	21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	OR1E3	Q8WZA6	343 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	TCF12	Q99081	682 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	UGT1A7	Q9HAW7	530 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	UGT1A10	Q9HAW8	530 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	UGT1A8	Q9HAW9	530 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	MRPL40	Q9NQ50	206 aa	Known RBP	21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	SMOX	Q9NWM0	555 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	DNAJC28	Q9NX36	388 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	KLF15	Q9UIH9	416 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	RIF1	Q5UIP0	2472 aa	Known RBP	21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	FRYL	O94915	3013 aa		21.71	■■□□□ 1.07
LTBP4-227	ENST00000600026	FAM186A	A6NE01	2351 aa		21.7	■■□□□ 1.07
LTBP4-227	ENST00000600026	TRBV5-4	A0A0C4DH59	114 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	EXOC1L	A0A1B0GW35	172 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	TNFRSF10C	O14798	259 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	DFNA5	O60443	496 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	SLC25A14	O95258	325 aa	Predicted RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	CSF2	P04141	144 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	CEACAM5	P06731	702 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	EPHA8	P29322	1005 aa	Predicted RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	RXRG	P48443	463 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	POLD2	P49005	469 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	ARRB1	P49407	418 aa	Predicted RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	TTPA	P49638	278 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	SRP54	P61011	504 aa	Known RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	PPARD	Q03181	441 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	ZNF648	Q5T619	568 aa	Predicted RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	PSAPL1	Q6NUJ1	521 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	KIAA0408	Q6ZU52	694 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	SLC26A11	Q86WA9	606 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	SERPINA9	Q86WD7	417 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	CILP2	Q8IUL8	1156 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	CNTN4	Q8IWV2	1026 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	PHACTR4	Q8IZ21	702 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	RBFA	Q8N0V3	343 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	PPM1N	Q8N819	430 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	GDAP1	Q8TB36	358 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	TSACC	Q96A04	125 aa	Predicted RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	TCEAL2	Q9H3H9	227 aa	Predicted RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	DNAAF2	Q9NVR5	837 aa	Known RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	MARCH4	Q9P2E8	410 aa	Predicted RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	TXNDC16	Q9P2K2	825 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	FBXO5	Q9UKT4	447 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	VPS9D1	Q9Y2B5	631 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	SLC17A4	Q9Y2C5	497 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	TMEM98	Q9Y2Y6	226 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	KNL1	Q8NG31	2342 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	EP300	Q09472	2414 aa	Predicted RBP	21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	CACNA1A	O00555	2505 aa		21.7	■■□□□ 1.06
LTBP4-227	ENST00000600026	MED19	A0JLT2	244 aa	Predicted RBP	21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	PRSS38	A1L453	326 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	AGAP14	A8MT82	685 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	ASMTL	O95671	621 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	IVL	P07476	585 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	NUDT17	P0C025	328 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	PRSS56	P0CW18	603 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	SLC1A2	P43004	574 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	IFFO1	Q0D2I5	559 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	RNF187	Q5TA31	235 aa	Predicted RBP	21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	MARK2	Q7KZI7	788 aa	Known RBP	21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	LRRC6	Q86X45	466 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	HID1	Q8IV36	788 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	NXPE1	Q8N323	547 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	DDHD1	Q8NEL9	900 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	SMYD2	Q9NRG4	433 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	TM7SF3	Q9NS93	570 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	VPS18	Q9P253	973 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	MOSPD1	Q9UJG1	213 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026	IKBKG	Q9Y6K9	419 aa		21.69	■■□□□ 1.06
LTBP4-227	ENST00000600026		H3BM21	787 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	DYNC1I1	O14576	645 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	SCAMP1	O15126	338 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	YKT6	O15498	198 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	SDC3	O75056	442 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	MTX2	O75431	263 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	NDUFS3	O75489	264 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	RASGRP1	O95267	797 aa		21.68	■■□□□ 1.06

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms