RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SLC29A3Q9BZD2 475 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 CEP44Q9C0F1 390 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 TMEM168Q9H0V1 697 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 FGF22Q9HCT0 170 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 ATP13A1Q9HD20 1204 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 PCYOX1Q9UHG3 505 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 MOSPD1Q9UJG1 213 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 POLHQ9Y253 713 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 APCP25054 2843 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 CDC14CA4D256 554 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 CFAP69A5D8W1 941 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 B4E171 279 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 H7C0C1 242 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 AREL1O15033 823 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 MATN3O15232 486 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 ZNF189O75820 626 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 STK17BO94768 372 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 FURINP09958 794 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 THRAP10827 490 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 F8A1P23610 371 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 RBL1P28749 1068 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 CD1CP29017 333 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 STIP1P31948 543 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 TSPAN7P41732 249 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 ATP5OP48047 213 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 KCNJ1P48048 391 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 ARF5P84085 180 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 C2orf54Q08AI8 447 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 TRA2AQ13595 282 aaKnown RBP eCLIP13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 SNX1Q13596 522 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 INPP5JQ15735 1006 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 WSCD2Q2TBF2 565 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 KRTAP21-3Q3LHN1 58 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 SNAP47Q5SQN1 464 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 TIGD7Q6NT04 549 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 CCDC137Q6PK04 289 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 B4GALNT4Q76KP1 1039 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 TTC7BQ86TV6 843 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 CDKL3Q8IVW4 592 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 MMGT1Q8N4V1 131 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 ATPAF2Q8N5M1 289 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 TEX26Q8N6G2 289 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 CCNYQ8ND76 341 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 C5orf34Q96MH7 638 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 ZNF599Q96NL3 588 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 TMEM121Q9BTD3 319 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 C10orf88Q9H8K7 445 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 NEU2Q9Y3R4 380 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 PCDHB3Q9Y5E6 796 aa13.8□□□□□ -0.2
SHKBP1-218ENST00000598907 CTAGE15A4D2H0 777 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 TMEM202A6NGA9 273 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 ZSCAN5CA6NGD5 496 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 A8MU76 341 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 HNRNPRO43390 633 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 SORBS2O94875 1100 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 CTAGE8P0CG41 777 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 STAT5AP42229 794 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 PTGIRP43119 386 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 PMS2P54278 862 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 IFI35P80217 286 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 AP1B1Q10567 949 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 WASHC5Q12768 1159 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 DARS2Q6PI48 645 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 CTAGE6Q86UF2 777 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 CTAGE4Q8IX94 777 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 OR4D9Q8NGE8 314 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 PATE1Q8WXA2 126 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 RUNDC3BQ96NL0 473 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 TEFMQ96QE5 360 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 APMAPQ9HDC9 416 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 FEZ2Q9UHY8 353 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 ITGB1BP2Q9UKP3 347 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 HPCAL4Q9UM19 191 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 ZNF148Q9UQR1 794 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 RPS6KL1Q9Y6S9 549 aa13.79□□□□□ -0.2
SHKBP1-218ENST00000598907 C5orf60A6NFR6 353 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 DIAPH2O60879 1101 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 DLSTP36957 453 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 PGDP52209 483 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 GDF10P55107 478 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 SLC20A2Q08357 652 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 RFTN1Q14699 578 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 INO80DQ53TQ3 878 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 ATXN7L2Q5T6C5 722 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 LEKR1Q6ZMV7 388 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 ZNF438Q7Z4V0 828 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 KLHL7Q8IXQ5 586 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 BMPERQ8N8U9 685 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 OR56A4Q8NGH8 313 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 ZDHHC1Q8WTX9 485 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 CASKIN2Q8WXE0 1202 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 KRT12Q99456 494 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 TRIM55Q9BYV6 548 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 SPRY4Q9C004 299 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 SP110Q9HB58 689 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 SPATS2LQ9NUQ6 558 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 SLC5A6Q9Y289 635 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 DGKBQ9Y6T7 804 aa13.78□□□□□ -0.2
SHKBP1-218ENST00000598907 HIVEP1P15822 2718 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms