RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 MOSPD1Q9UJG1 213 aa14.85□□□□□ -0.03
TRIM28-207ENST00000597136 PCYT1BQ9Y5K3 369 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 COL5A1P20908 1838 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-207ENST00000597136 A0A087WUV0 522 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 CCDC162PA2VCL2 907 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 H7C0S8 307 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 PIAS2O75928 621 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 C1QAP02745 245 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 CELA2BP08218 269 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 ZNF883P0CG24 379 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 ERVK-10P10266 1014 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 NME1P15531 152 aaKnown RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 HTR1BP28222 390 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 EPHA8P29322 1005 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 STX2P32856 288 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 ARRB1P49407 418 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 CCT8P50990 548 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 SRP54P61011 504 aaKnown RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 PRAMEP78395 509 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 XIAPP98170 497 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 PPARDQ03181 441 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 PEX6Q13608 980 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 KIF26BQ2KJY2 2108 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 KHDC1Q4VXA5 237 aaKnown RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 PDPK2PQ6A1A2 396 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 ZNF449Q6P9G9 518 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 PHACTR4Q8IZ21 702 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 TRAM1L1Q8N609 369 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 OR6P1Q8NGX9 317 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 CERS2Q96G23 380 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 PLEKHG4BQ96PX9 1271 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 FAM96AQ9H5X1 160 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 CYP4F12Q9HCS2 524 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 PPANQ9NQ55 473 aaKnown RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 C20orf96Q9NUD7 363 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 KLQ9UEF7 1012 aa14.84□□□□□ -0.03
TRIM28-207ENST00000597136 CDV3Q9UKY7 258 aaKnown RBP14.84□□□□□ -0.03
TRIM28-207ENST00000597136 DCDC2BA2VCK2 349 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 GOLGA8KD6RF30 607 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 GOLGA8TH3BQL2 631 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 PCDHGA12O60330 932 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 MTX2O75431 263 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 GOT2P00505 430 aaKnown RBP14.83□□□□□ -0.04
TRIM28-207ENST00000597136 GIMD1P0DJR0 217 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 SPAM1P38567 509 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 HK3P52790 923 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 MGAT5Q09328 741 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 SMAD1Q15797 465 aaKnown RBP14.83□□□□□ -0.04
TRIM28-207ENST00000597136 KBTBD12Q3ZCT8 623 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 ZDHHC20Q5W0Z9 365 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 MARK2Q7KZI7 788 aaKnown RBP14.83□□□□□ -0.04
TRIM28-207ENST00000597136 PIP4P1Q86T03 277 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 KCNMB4Q86W47 210 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 IQCKQ8N0W5 287 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 OXR1Q8N573 874 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 PNPLA1Q8N8W4 532 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 SETD7Q8WTS6 366 aaKnown RBP14.83□□□□□ -0.04
TRIM28-207ENST00000597136 BTN2A2Q8WVV5 523 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 SGSM3Q96HU1 749 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 ZSCAN5AQ9BUG6 496 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 CLPBQ9H078 707 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 ACSS3Q9H6R3 686 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 RAD18Q9NS91 495 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 PLEKHM1Q9Y4G2 1056 aa14.83□□□□□ -0.04
TRIM28-207ENST00000597136 GLYATL1P3A0A0U1RQE8 302 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 PRSS38A1L453 326 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 OR51F1A6NGY5 319 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 FAM159BA6NKW6 160 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 PIAS1O75925 651 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 SLC25A14O95258 325 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-207ENST00000597136 ASMTLO95671 621 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 SHBGP04278 402 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 NUDT17P0C025 328 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 PRSS56P0CW18 603 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 CDKN1CP49918 316 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-207ENST00000597136 HNRNPKP61978 463 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRIM28-207ENST00000597136 SLC14A1Q13336 389 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 CASP8Q14790 479 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 HSP90AA5PQ58FG0 334 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 PRRT3Q5FWE3 981 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 NEPROQ6NW34 567 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 AFTPHQ6ULP2 937 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 EID2Q8N6I1 236 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 OR4L1Q8NH43 312 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 CCL4L1Q8NHW4 92 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 ZNF398Q8TD17 642 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 LMX1AQ8TE12 382 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 GLYATL1Q969I3 302 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 CYTH2Q99418 400 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 TMEM168Q9H0V1 697 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 CDH19Q9H159 772 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 SMYD2Q9NRG4 433 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 DLL3Q9NYJ7 618 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 APOBEC3BQ9UH17 382 aaKnown RBP14.82□□□□□ -0.04
TRIM28-207ENST00000597136 APPL1Q9UKG1 709 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 SUFUQ9UMX1 484 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 PLAAQ9Y263 795 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 SLC17A4Q9Y2C5 497 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 PRKAB1Q9Y478 270 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 PCDHGB2Q9Y5G2 931 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms