RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 MS4A14Q96JA4 679 aa20.78■□□□□ 0.92
PNKP-209ENST00000596726 DNAJC1Q96KC8 554 aaKnown RBP20.78■□□□□ 0.92
PNKP-209ENST00000596726 ZCCHC2Q9C0B9 1178 aaKnown RBP20.78■□□□□ 0.92
PNKP-209ENST00000596726 SYNDIG1Q9H7V2 258 aa20.78■□□□□ 0.92
PNKP-209ENST00000596726 NLE1Q9NVX2 485 aaPredicted RBP20.78■□□□□ 0.92
PNKP-209ENST00000596726 PIH1D1Q9NWS0 290 aaKnown RBP20.78■□□□□ 0.92
PNKP-209ENST00000596726 TRBV23OR9-2A0A075B6M9 112 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 A0A1W2PNU3 283 aaPredicted RBP20.77■□□□□ 0.92
PNKP-209ENST00000596726 MROH6A6NGR9 719 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 GRIA1P42261 906 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 CTSCP53634 463 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 OR1D5P58170 312 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 INSCQ1MX18 579 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 TRAPPC5Q8IUR0 188 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 ATXN7L3BQ96GX2 97 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 TTC25Q96NG3 672 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 SARS2Q9NP81 518 aaKnown RBP20.77■□□□□ 0.92
PNKP-209ENST00000596726 CASS4Q9NQ75 786 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 PRDM8Q9NQV8 689 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 DNMT3AQ9Y6K1 912 aaPredicted RBP20.77■□□□□ 0.92
PNKP-209ENST00000596726 AK5Q9Y6K8 562 aa20.77■□□□□ 0.92
PNKP-209ENST00000596726 ANKRD11Q6UB99 2663 aaPredicted RBP20.77■□□□□ 0.92
PNKP-209ENST00000596726 CACNA1BQ00975 2339 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 OR5K4A6NMS3 321 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 SRRM3A6NNA2 597 aaPredicted RBP20.76■□□□□ 0.91
PNKP-209ENST00000596726 USP27XA6NNY8 438 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 E7EVH7 732 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 CCL22O00626 93 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 KIF5CO60282 957 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 SNX2O60749 519 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 KCNJ13O60928 360 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 SLC2A4P14672 509 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 MSNP26038 577 aaKnown RBP20.76■□□□□ 0.91
PNKP-209ENST00000596726 LSSP48449 732 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 LMAN1P49257 510 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 PLA2G4EQ3MJ16 856 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 SNX20Q7Z614 316 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 B3GNT8Q7Z7M8 397 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 CDKN2AIPNLQ96HQ2 116 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 OSBPL9Q96SU4 736 aa20.76■□□□□ 0.91
PNKP-209ENST00000596726 ATXN7L1Q9ULK2 861 aaPredicted RBP20.76■□□□□ 0.91
PNKP-209ENST00000596726 URB1O60287 2271 aaKnown RBP20.75■□□□□ 0.91
PNKP-209ENST00000596726 TRBV5-4A0A0C4DH59 114 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 KIR2DS5A0A0G2JLQ3 304 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 A0A0G2JNG1 304 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 TMX2-CTNND1H3BSU7 103 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 KIR2DS3K7RE56 304 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 ZW10O43264 779 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 APRTP07741 180 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 ITGALP20701 1170 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 ALDH4A1P30038 563 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 CCKBRP32239 447 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 MC4RP32245 332 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 ZFP36L1Q07352 338 aaKnown RBP20.75■□□□□ 0.91
PNKP-209ENST00000596726 DMPKQ09013 629 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 BIRC2Q13490 618 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 SQSTM1Q13501 440 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 SEPT6Q14141 434 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 KIR2DS5Q14953 304 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 CYP1B1Q16678 543 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 CLPPQ16740 277 aaPredicted RBP20.75■□□□□ 0.91
PNKP-209ENST00000596726 GPR33Q49SQ1 333 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 TMEM220Q6QAJ8 160 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 ABRAXAS1Q6UWZ7 409 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 WASH2PQ6VEQ5 465 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 PPP1R21Q6ZMI0 780 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 GSTA5Q7RTV2 222 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 TMPRSS9Q7Z410 1059 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 NXPE1Q8N323 547 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 DNAAF3Q8N9W5 541 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 COG1Q8WTW3 980 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 ULK4Q96C45 1275 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 LIN37Q96GY3 246 aaPredicted RBP20.75■□□□□ 0.91
PNKP-209ENST00000596726 RANBP9Q96S59 729 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 OSGEPL1Q9H4B0 414 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 POLR1BQ9H9Y6 1135 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 WASH6PQ9NQA3 447 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 EIF2B3Q9NR50 452 aaKnown RBP20.75■□□□□ 0.91
PNKP-209ENST00000596726 SCHIP1Q9P0W5 487 aaPredicted RBP20.75■□□□□ 0.91
PNKP-209ENST00000596726 CRLS1Q9UJA2 301 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 SNX12Q9UMY4 172 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 DNAJC16Q9Y2G8 782 aa20.75■□□□□ 0.91
PNKP-209ENST00000596726 PIKFYVEQ9Y2I7 2098 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 IGHV1OR21-1A0A087WYE8 117 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 CES2O00748 559 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 SGTAO43765 313 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 BRINP1O60477 761 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 POP7O75817 140 aaKnown RBP20.74■□□□□ 0.91
PNKP-209ENST00000596726 DXOO77932 396 aaKnown RBP20.74■□□□□ 0.91
PNKP-209ENST00000596726 MPOP05164 745 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 XRCC1P18887 633 aaPredicted RBP20.74■□□□□ 0.91
PNKP-209ENST00000596726 MSH3P20585 1137 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 CD1CP29017 333 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 INHBCP55103 352 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 UBE2IP63279 158 aaKnown RBP20.74■□□□□ 0.91
PNKP-209ENST00000596726 GABREP78334 506 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 HHEXQ03014 270 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 AGAP9Q5VTM2 703 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 TTC27Q6P3X3 843 aa20.74■□□□□ 0.91
PNKP-209ENST00000596726 IGF2-ASQ6U949 168 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms