RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 DPYSL5Q9BPU6 564 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 APOL2Q9BQE5 337 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 SYNDIG1Q9H7V2 258 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 UGT1A7Q9HAW7 530 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 UGT1A10Q9HAW8 530 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 UGT1A8Q9HAW9 530 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 WASH6PQ9NQA3 447 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 THSD1Q9NS62 852 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 KLC4Q9NSK0 619 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 PDP2Q9P2J9 529 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 DNMT3AQ9Y6K1 912 aaPredicted RBP12.87□□□□□ -0.35
USE1-207ENST00000596136 RRP8O43159 456 aaKnown RBP12.86□□□□□ -0.35
USE1-207ENST00000596136 PSMD3O43242 534 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 LDB2O43679 373 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 CRTAMO95727 393 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 AP2A1O95782 977 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 ITGA2BP08514 1039 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 PSMA3P25788 255 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 RBMS1P29558 406 aaKnown RBP12.86□□□□□ -0.35
USE1-207ENST00000596136 ZNF140P52738 457 aaPredicted RBP12.86□□□□□ -0.35
USE1-207ENST00000596136 LIMK2P53671 638 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 PCBP4P57723 403 aaKnown RBP12.86□□□□□ -0.35
USE1-207ENST00000596136 UBE2IP63279 158 aaKnown RBP12.86□□□□□ -0.35
USE1-207ENST00000596136 HHEXQ03014 270 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 COL28A1Q2UY09 1125 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 P3H1Q32P28 736 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 GPRC6AQ5T6X5 926 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 AGAP9Q5VTM2 703 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 ABRAXAS1Q6UWZ7 409 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 FAM151BQ6UXP7 276 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 SLC9B2Q86UD5 537 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 FBXO39Q8N4B4 442 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 AVL9Q8NBF6 648 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 ZNF248Q8NDW4 579 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 TRIM58Q8NG06 486 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 OR4D9Q8NGE8 314 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 HNRNPLLQ8WVV9 542 aaKnown RBP12.86□□□□□ -0.35
USE1-207ENST00000596136 ATG4AQ8WYN0 398 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 SH3KBP1Q96B97 665 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 LRRC45Q96CN5 670 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 NUDT22Q9BRQ3 303 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 TLR10Q9BXR5 811 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 B3GNT4Q9C0J1 378 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 SEMA6CQ9H3T2 930 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 LRRC40Q9H9A6 602 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 UCK1Q9HA47 277 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 EPB41L5Q9HCM4 733 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 LZTFL1Q9NQ48 299 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 PRDM8Q9NQV8 689 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 ACSL6Q9UKU0 697 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 KCTD3Q9Y597 815 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 PCDHGA7Q9Y5G6 932 aa12.86□□□□□ -0.35
USE1-207ENST00000596136 TRBV23OR9-2A0A075B6M9 112 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 ERI2A8K979 691 aaKnown RBP12.85□□□□□ -0.35
USE1-207ENST00000596136 H7C0S8 307 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 HGSO14964 777 aaPredicted RBP12.85□□□□□ -0.35
USE1-207ENST00000596136 GPR39O43194 453 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 SRP72O76094 671 aaKnown RBP12.85□□□□□ -0.35
USE1-207ENST00000596136 TNFSF15O95150 251 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 HOXB3P14651 431 aaPredicted RBP12.85□□□□□ -0.35
USE1-207ENST00000596136 ITPKBP27987 946 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 EPHA4P54764 986 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 DMPKQ09013 629 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 BIRC2Q13490 618 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 TRA2AQ13595 282 aaKnown RBP eCLIP12.85□□□□□ -0.35
USE1-207ENST00000596136 SPARCL1Q14515 664 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 SIX1Q15475 284 aaPredicted RBP12.85□□□□□ -0.35
USE1-207ENST00000596136 AMZ1Q400G9 498 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 DRICH1Q6PGQ1 229 aaPredicted RBP12.85□□□□□ -0.35
USE1-207ENST00000596136 C19orf48Q6RUI8 117 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 CRTC3Q6UUV7 619 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 LRRC69Q6ZNQ3 347 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 USP53Q70EK8 1073 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 RASGEF1AQ8N9B8 481 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 GDAP1Q8TB36 358 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 ZNF514Q96K75 400 aaPredicted RBP12.85□□□□□ -0.35
USE1-207ENST00000596136 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 ALS2CR12Q96Q35 445 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 DPH1Q9BZG8 443 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 ZCCHC2Q9C0B9 1178 aaKnown RBP12.85□□□□□ -0.35
USE1-207ENST00000596136 RDH14Q9HBH5 336 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 KCNK4Q9NYG8 393 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 SCHIP1Q9P0W5 487 aaPredicted RBP12.85□□□□□ -0.35
USE1-207ENST00000596136 CPNE7Q9UBL6 633 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 PPP2R2CQ9Y2T4 447 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
USE1-207ENST00000596136 IGHV5-10-1A0A0J9YXX1 117 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 LILRA5A6NI73 299 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 NVLO15381 856 aaKnown RBP12.84□□□□□ -0.35
USE1-207ENST00000596136 SNX2O60749 519 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 SUN1O94901 812 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 PRAMEF1O95521 474 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 BRAFP15056 766 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 IDSP22304 550 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 CSF2RBP32927 897 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 HADHAP40939 763 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 SLC19A1P41440 591 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 ABCG1P45844 678 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 CTSCP53634 463 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms