RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	PSKH2	Q96QS6	385 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	RIOK2	Q9BVS4	552 aa	Known RBP	13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TRIM7	Q9C029	511 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	NOD2	Q9HC29	1040 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LUC7L2	Q9Y383	392 aa	Known RBP	13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	BZW2	Q9Y6E2	419 aa	Known RBP	13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SCIN	Q9Y6U3	715 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	KIR2DS5	A0A0G2JLQ3	304 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726		A0A0G2JNG1	304 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TMEM191C	A6NGB0	347 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	KIR2DS3	K7RE56	304 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PSMD11	O00231	422 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TOX3	O15405	576 aa	Predicted RBP	13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	FGF10	O15520	208 aa	Predicted RBP	13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TMEM63A	O94886	807 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	MYBL1	P10243	752 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CYP2A6	P11509	494 aa	Predicted RBP	13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	DES	P17661	470 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LPO	P22079	712 aa	Predicted RBP	13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TPI1	P60174	286 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PPP1CA	P62136	330 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PTS	Q03393	145 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	KIR2DS5	Q14953	304 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LCN10	Q6JVE6	187 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CERS6	Q6ZMG9	384 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TMEM26	Q6ZUK4	368 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PGBD5	Q8N414	524 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ARFGAP1	Q8N6T3	406 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	RNF214	Q8ND24	703 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ADAMTS17	Q8TE56	1095 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SPOCK2	Q92563	424 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	HERPUD2	Q9BSE4	406 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SP110	Q9HB58	689 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	GPR83	Q9NYM4	423 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CNOT6	Q9ULM6	557 aa	Known RBP	13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PHTF1	Q9UMS5	762 aa		13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	COPG1	Q9Y678	874 aa	Known RBP	13.53	□□□□□ -0.24
SHKBP1-208	ENST00000595726	MED13L	Q71F56	2210 aa		13.52	□□□□□ -0.24
SHKBP1-208	ENST00000595726	IGHV5-51	A0A0C4DH38	117 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	PRSS44	E7EML9	344 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	CBFA2T2	O43439	604 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	NELFE	P18615	380 aa	Known RBP	13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	SLC19A1	P41440	591 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	TUBB3	Q13509	450 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	LBR	Q14739	615 aa	Known RBP	13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	ZRSR2	Q15696	482 aa	Known RBP	13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	CA9	Q16790	459 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	LRRC66	Q68CR7	880 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	IRGC	Q6NXR0	463 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	NPW	Q8N729	165 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	EXD1	Q8NHP7	514 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	INPP5D	Q92835	1189 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	MR1	Q95460	341 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	PEBP4	Q96S96	227 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	PDE7B	Q9NP56	450 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	ARFGAP3	Q9NP61	516 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	MYO1A	Q9UBC5	1043 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	RARRES3	Q9UL19	164 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	OSGIN2	Q9Y236	505 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	B3GNT3	Q9Y2A9	372 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	NAV3	Q8IVL0	2385 aa		13.52	□□□□□ -0.25
SHKBP1-208	ENST00000595726	MAP1A	P78559	2803 aa	Predicted RBP	13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726		A0A087X0T9	212 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	SSU72P8	A0A1W2PR75	194 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	DIAPH2	O60879	1101 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	SOCS5	O75159	536 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	VIP	P01282	170 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	PDHA1	P08559	390 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	FAM228B	P0C875	321 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	GLRB	P48167	497 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	MAX	P61244	160 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	IL10RB	Q08334	325 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	TRIM14	Q14142	442 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	RFTN1	Q14699	578 aa	Predicted RBP	13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	KYNU	Q16719	465 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	CRB2	Q5IJ48	1285 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	ZNF648	Q5T619	568 aa	Predicted RBP	13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	PRSS42	Q7Z5A4	293 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	SIDT2	Q8NBJ9	832 aa	Known RBP	13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	SLC38A9	Q8NBW4	561 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	SMAD5	Q99717	465 aa	Known RBP	13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	MLPH	Q9BV36	600 aa	Predicted RBP	13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	SNRNP25	Q9BV90	132 aa	Known RBP	13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	THAP2	Q9H0W7	228 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	CHST8	Q9H2A9	424 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	OSGEPL1	Q9H4B0	414 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	MRPL47	Q9HD33	250 aa	Known RBP	13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726	AP4E1	Q9UPM8	1137 aa		13.51	□□□□□ -0.25
SHKBP1-208	ENST00000595726		A0A1W2PQ67	120 aa		13.5	□□□□□ -0.25
SHKBP1-208	ENST00000595726	OR5K4	A6NMS3	321 aa		13.5	□□□□□ -0.25
SHKBP1-208	ENST00000595726	RNF8	O76064	485 aa		13.5	□□□□□ -0.25
SHKBP1-208	ENST00000595726	PGLS	O95336	258 aa		13.5	□□□□□ -0.25
SHKBP1-208	ENST00000595726	EBLN1	P0CF75	366 aa		13.5	□□□□□ -0.25
SHKBP1-208	ENST00000595726	SLC2A4	P14672	509 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms