RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 ZW10O43264 779 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 B4GAT1O43505 415 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 CPNE6O95741 557 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 F3P13726 295 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 SLC2A4P14672 509 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 LPOP22079 712 aaPredicted RBP14.9□□□□□ -0.02
TRIM28-205ENST00000595028 PCBP4P57723 403 aaKnown RBP14.9□□□□□ -0.02
TRIM28-205ENST00000595028 ERVPABLB-1P60509 514 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 MSLNQ13421 630 aaPredicted RBP14.9□□□□□ -0.02
TRIM28-205ENST00000595028 ITGA9Q13797 1035 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 GTF2H3Q13889 308 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 PTPRCAPQ14761 206 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 OASLQ15646 514 aaKnown RBP14.9□□□□□ -0.02
TRIM28-205ENST00000595028 CLPPQ16740 277 aaPredicted RBP14.9□□□□□ -0.02
TRIM28-205ENST00000595028 INSCQ1MX18 579 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 PARP6Q2NL67 630 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 PLA2G4EQ3MJ16 856 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 AMZ1Q400G9 498 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 KCTD11Q693B1 232 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 DENND5AQ6IQ26 1287 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 TMPRSS9Q7Z410 1059 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 ZNF547Q8IVP9 402 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 SLITRK4Q8IW52 837 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 DDHD1Q8NEL9 900 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 GDAP1Q8TB36 358 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 LRRC45Q96CN5 670 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 PRR11Q96HE9 360 aaPredicted RBP14.9□□□□□ -0.02
TRIM28-205ENST00000595028 TIMM29Q9BSF4 260 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 FRMD8P1Q9BZ68 369 aaPredicted RBP14.9□□□□□ -0.02
TRIM28-205ENST00000595028 ZCCHC2Q9C0B9 1178 aaKnown RBP14.9□□□□□ -0.02
TRIM28-205ENST00000595028 STRADBQ9C0K7 418 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 CLMPQ9H6B4 373 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 LRRC40Q9H9A6 602 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 ARNT2Q9HBZ2 717 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 THSD1Q9NS62 852 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 KLC4Q9NSK0 619 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 TEX51A0A1B0GUA7 166 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 PRR19A6NJB7 356 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 KMOO15229 486 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 LIASO43766 372 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 SNX2O60749 519 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 CDK14O94921 469 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 PRAMEF1O95521 474 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 METTL18O95568 372 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 RBMS1P29558 406 aaKnown RBP14.89□□□□□ -0.03
TRIM28-205ENST00000595028 ALDH4A1P30038 563 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 CA5AP35218 305 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 MLLT3P42568 568 aaPredicted RBP14.89□□□□□ -0.03
TRIM28-205ENST00000595028 ZNF140P52738 457 aaPredicted RBP14.89□□□□□ -0.03
TRIM28-205ENST00000595028 ZFP36L1Q07352 338 aaKnown RBP14.89□□□□□ -0.03
TRIM28-205ENST00000595028 SPARCL1Q14515 664 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 LDLRAP1Q5SW96 308 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.89□□□□□ -0.03
TRIM28-205ENST00000595028 GPRC6AQ5T6X5 926 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 RAB11FIP2Q7L804 512 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 TRAPPC5Q8IUR0 188 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 TRIM58Q8NG06 486 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 OR4K2Q8NGD2 314 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 BRSK1Q8TDC3 778 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 NUDT22Q9BRQ3 303 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 OSGEPL1Q9H4B0 414 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 STN1Q9H668 368 aaKnown RBP14.89□□□□□ -0.03
TRIM28-205ENST00000595028 GRPEL1Q9HAV7 217 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 RDH14Q9HBH5 336 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 SARS2Q9NP81 518 aaKnown RBP14.89□□□□□ -0.03
TRIM28-205ENST00000595028 FKBPLQ9UIM3 349 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 PPP2R2CQ9Y2T4 447 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 KCTD3Q9Y597 815 aa14.89□□□□□ -0.03
TRIM28-205ENST00000595028 TRBV23OR9-2A0A075B6M9 112 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 IGHV1OR21-1A0A087WYE8 117 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 KIR2DS5A0A0G2JLQ3 304 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 A0A0G2JNG1 304 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 OR5K4A6NMS3 321 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 PYCARD-AS1I3L0S3 204 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 KIR2DS3K7RE56 304 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 PLD2O14939 933 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 RRP8O43159 456 aaKnown RBP14.88□□□□□ -0.03
TRIM28-205ENST00000595028 UGT1A9O60656 530 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 CRTAMO95727 393 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 AP2A1O95782 977 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 ITGA2BP08514 1039 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 ZNF7P17097 686 aaPredicted RBP14.88□□□□□ -0.03
TRIM28-205ENST00000595028 UGT1A6P19224 532 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 UGT1A1P22309 533 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 UGT1A4P22310 534 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 CD1CP29017 333 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 CSF2RBP32927 897 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 UGT1A3P35503 534 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 UGT1A5P35504 534 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 PDE1BQ01064 536 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 HHEXQ03014 270 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 TMEM115Q12893 351 aaPredicted RBP14.88□□□□□ -0.03
TRIM28-205ENST00000595028 KIR2DS5Q14953 304 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 IYDQ6PHW0 289 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 FOXR1Q6PIV2 292 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 GPR155Q7Z3F1 870 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 C11orf96Q7Z7L8 435 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 CLEC14AQ86T13 490 aa14.88□□□□□ -0.03
TRIM28-205ENST00000595028 ZNF761Q86XN6 746 aaPredicted RBP14.88□□□□□ -0.03
TRIM28-205ENST00000595028 AVL9Q8NBF6 648 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms