RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 NCSTNQ92542 709 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 WBP1Q96G27 269 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 FSD1LQ9BXM9 530 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 OSBPL8Q9BZF1 889 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.15■■□□□ 1.3
LSM4-204ENST00000594828 IL17CQ9P0M4 197 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 MACROD2A1Z1Q3 448 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 XRCC1P18887 633 aaPredicted RBP23.14■■□□□ 1.29
LSM4-204ENST00000594828 CTNNA2P26232 953 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 SPAM1P38567 509 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 CETN2P41208 172 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 MAPK9P45984 424 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 EPHA4P54764 986 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 RWDD2BP57060 319 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 SNAP47Q5SQN1 464 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 ITPRIPL1Q6GPH6 555 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 GLT6D1Q7Z4J2 308 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 ACRBPQ8NEB7 543 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 DTX3LQ8TDB6 740 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 BRSK1Q8TDC3 778 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 TTC25Q96NG3 672 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 TIMM29Q9BSF4 260 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 GBA3Q9H227 469 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 DNAJC16Q9Y2G8 782 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 PKP3Q9Y446 797 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 PCDHGA3Q9Y5H0 932 aa23.14■■□□□ 1.29
LSM4-204ENST00000594828 A8MU76 341 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 PJA2O43164 708 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 ANXA9O76027 345 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 AGTP01019 485 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 PTPN7P35236 360 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 VAV2P52735 878 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 GEMP55040 296 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 GTF2H3Q13889 308 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 MANEAQ5SRI9 462 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 KIAA1614Q5VZ46 1190 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 DTX1Q86Y01 620 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 ZNF547Q8IVP9 402 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 CDKL3Q8IVW4 592 aaPredicted RBP23.13■■□□□ 1.29
LSM4-204ENST00000594828 TTC9Q92623 222 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 ART4Q93070 314 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 TBC1D10AQ9BXI6 508 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 OCIAD1Q9NX40 245 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 SLC39A1Q9NY26 324 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 SCHIP1Q9P0W5 487 aaPredicted RBP23.13■■□□□ 1.29
LSM4-204ENST00000594828 ATRXP46100 2492 aa23.13■■□□□ 1.29
LSM4-204ENST00000594828 EFCAB7A8K855 629 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 PDZK1P1A8MUH7 402 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.12■■□□□ 1.29
LSM4-204ENST00000594828 BUD23O43709 281 aaKnown RBP23.12■■□□□ 1.29
LSM4-204ENST00000594828 C1QL1O75973 258 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 VIPP01282 170 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 RBP3P10745 1247 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 EIF3EP60228 445 aaKnown RBP23.12■■□□□ 1.29
LSM4-204ENST00000594828 UBE2IP63279 158 aaKnown RBP23.12■■□□□ 1.29
LSM4-204ENST00000594828 SRSF6Q13247 344 aaKnown RBP23.12■■□□□ 1.29
LSM4-204ENST00000594828 CHRNA6Q15825 494 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 DARS2Q6PI48 645 aaKnown RBP23.12■■□□□ 1.29
LSM4-204ENST00000594828 FAM151BQ6UXP7 276 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 KIAA1328Q86T90 577 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 GAS2L3Q86XJ1 694 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 FAM129CQ86XR2 697 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 BAG1Q99933 345 aaPredicted RBP23.12■■□□□ 1.29
LSM4-204ENST00000594828 EPB41L1Q9H4G0 881 aa23.12■■□□□ 1.29
LSM4-204ENST00000594828 GLYATL1P3A0A0U1RQE8 302 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 B4E171 279 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 STMND1H3BQB6 276 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 UGT1A9O60656 530 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 PPFIA2O75334 1257 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 TJP3O95049 919 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 PYGMP11217 842 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 VCLP18206 1134 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 UGT1A6P19224 532 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 IDSP22304 550 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 UGT1A1P22309 533 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 UGT1A4P22310 534 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 UGT1A3P35503 534 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 SLC19A1P41440 591 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 TSPAN7P41732 249 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 SEPT7Q16181 437 aaKnown RBP23.11■■□□□ 1.29
LSM4-204ENST00000594828 ANKRD20A2Q5SQ80 823 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 ANKRD20A1Q5TYW2 823 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 ANKRD20A3Q5VUR7 823 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 ABRAXAS1Q6UWZ7 409 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 ARHGAP22Q7Z5H3 698 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 TRAPPC5Q8IUR0 188 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 TRIM48Q8IWZ4 208 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 LRRC57Q8N9N7 239 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 ALG3Q92685 438 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 PMEPA1Q969W9 287 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 FAM118BQ9BPY3 351 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 GORASP1Q9BQQ3 440 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 FICDQ9BVA6 458 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 DDA1Q9BW61 102 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 ASPSCR1Q9BZE9 553 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 UCK1Q9HA47 277 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 UGT1A7Q9HAW7 530 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 UGT1A10Q9HAW8 530 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 UGT1A8Q9HAW9 530 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 ZNF624Q9P2J8 865 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms