RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 OR2AP1Q8NGE2 309 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 GDPD5Q8WTR4 605 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 HERVK_113Q902F9 699 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 VOPP1Q96AW1 172 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 TCEAL4Q96EI5 215 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 TNKS2Q9H2K2 1166 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 VCX3BQ9H321 246 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 SARS2Q9NP81 518 aaKnown RBP19.48■□□□□ 0.71
CLIP3-206ENST00000593074 APPL1Q9UKG1 709 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 PSMD13Q9UNM6 376 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 CCL26Q9Y258 94 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 E2F3O00716 465 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 IRX1P78414 480 aaPredicted RBP19.48■□□□□ 0.71
CLIP3-206ENST00000593074 TEAD2Q15562 447 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 TGFBIQ15582 683 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 ZFP1Q6P2D0 407 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 PAOXQ6QHF9 649 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 SYVN1Q86TM6 617 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 RBFAQ8N0V3 343 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 CCDC97Q96F63 343 aaPredicted RBP19.48■□□□□ 0.71
CLIP3-206ENST00000593074 LYSMD1Q96S90 227 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 CLPBQ9H078 707 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 IL26Q9NPH9 171 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 MRPL40Q9NQ50 206 aaKnown RBP19.48■□□□□ 0.71
CLIP3-206ENST00000593074 NUDT4Q9NZJ9 180 aa19.48■□□□□ 0.71
CLIP3-206ENST00000593074 SUCOQ9UBS9 1254 aaKnown RBP19.48■□□□□ 0.71
CLIP3-206ENST00000593074 BBIP1A8MTZ0 92 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 MRASO14807 208 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 NRP2O60462 931 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 SNX2O60749 519 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 PRR35P0CG20 571 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 ITGALP20701 1170 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 SERPINA4P29622 427 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 CA5AP35218 305 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 MRPS35P82673 323 aaKnown RBP19.47■□□□□ 0.71
CLIP3-206ENST00000593074 GRB7Q14451 532 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 PITRM1Q5JRX3 1037 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 OGFOD2Q6N063 350 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 EFL1Q7Z2Z2 1120 aaKnown RBP19.47■□□□□ 0.71
CLIP3-206ENST00000593074 UBE2Q1Q7Z7E8 422 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 ZSWIM9Q86XI8 627 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 RNF148Q8N7C7 305 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 DNAJC5GQ8N7S2 189 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 SNX31Q8N9S9 440 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 DLG3Q92796 817 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 PLEKHG4BQ96PX9 1271 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 ZDHHC7Q9NXF8 308 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 CD274Q9NZQ7 290 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 C6orf203Q9P0P8 240 aaPredicted RBP19.47■□□□□ 0.71
CLIP3-206ENST00000593074 GNPTGQ9UJJ9 305 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 ZNF225Q9UK10 706 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 HS3ST2Q9Y278 367 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 BTRCQ9Y297 605 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 TRIM24O15164 1050 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 CLDN7O95471 211 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 SRCP12931 536 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 BPIP17213 487 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 LBPP18428 481 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 EN2P19622 333 aaPredicted RBP19.47■□□□□ 0.71
CLIP3-206ENST00000593074 ACRV1P26436 265 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 KIF19Q2TAC6 998 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 ADAMTSL2Q86TH1 951 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 PCDH20Q8N6Y1 951 aaKnown RBP19.47■□□□□ 0.71
CLIP3-206ENST00000593074 PAF1Q8N7H5 531 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 BHLHE22Q8NFJ8 381 aaPredicted RBP19.47■□□□□ 0.71
CLIP3-206ENST00000593074 OR56A4Q8NGH8 313 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 ISG20Q96AZ6 181 aaKnown RBP19.47■□□□□ 0.71
CLIP3-206ENST00000593074 ASB9Q96DX5 294 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 HGH1Q9BTY7 390 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 ASB8Q9H765 288 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 SPAG4Q9NPE6 437 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 SDR39U1Q9NRG7 319 aaPredicted RBP19.47■□□□□ 0.71
CLIP3-206ENST00000593074 GIMAP2Q9UG22 337 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 EIF2B4Q9UI10 523 aaKnown RBP19.47■□□□□ 0.71
CLIP3-206ENST00000593074 RWDD3Q9Y3V2 267 aa19.47■□□□□ 0.71
CLIP3-206ENST00000593074 E7ENX8 843 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 MOSPD3O75425 235 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 CRCPO75575 148 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 MATN4O95460 622 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 RHOP08100 348 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 LINC00032P0C843 101 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 UROSP10746 265 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 PEX2P28328 305 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 PRDX3P30048 256 aaKnown RBP19.46■□□□□ 0.71
CLIP3-206ENST00000593074 UBE3AQ05086 875 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 XKR7Q5GH72 579 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 LYPLAL1Q5VWZ2 237 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 PTRHD1Q6GMV3 140 aaKnown RBP19.46■□□□□ 0.71
CLIP3-206ENST00000593074 SBSNQ6UWP8 590 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 PDSS2Q86YH6 399 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 PQLC1Q8N2U9 271 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 MIER2Q8N344 545 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 CBARPQ8N350 705 aaPredicted RBP19.46■□□□□ 0.71
CLIP3-206ENST00000593074 ROPN1LQ96C74 230 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 TUBGCP3Q96CW5 907 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 TUBGCP5Q96RT8 1024 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 ZNF382Q96SR6 550 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 C17orf80Q9BSJ5 609 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 BOCQ9BWV1 1114 aa19.46■□□□□ 0.71
CLIP3-206ENST00000593074 CIPCQ9C0C6 399 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms