RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 C11orf63Q6NUN7 778 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 CRTC3Q6UUV7 619 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 KDELC1Q6UW63 502 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 ABRAXAS1Q6UWZ7 409 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 TMEM26Q6ZUK4 368 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 TRIM48Q8IWZ4 208 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 NLGN4XQ8N0W4 816 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 NLGN4YQ8NFZ3 816 aaPredicted RBP13.08□□□□□ -0.32
APOC1-209ENST00000592885 HTR3CQ8WXA8 447 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 P3H4Q92791 437 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 KIAA1143Q96AT1 154 aaPredicted RBP13.08□□□□□ -0.32
APOC1-209ENST00000592885 RBM41Q96IZ5 413 aaKnown RBP13.08□□□□□ -0.32
APOC1-209ENST00000592885 QKIQ96PU8 341 aaKnown RBP eCLIP13.08□□□□□ -0.32
APOC1-209ENST00000592885 FCRL5Q96RD9 977 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 SPRY4Q9C004 299 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 FAM117AQ9C073 453 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 LUC7LQ9NQ29 371 aaKnown RBP13.08□□□□□ -0.32
APOC1-209ENST00000592885 PRDM8Q9NQV8 689 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
APOC1-209ENST00000592885 TMEM184BQ9Y519 407 aaPredicted RBP13.08□□□□□ -0.32
APOC1-209ENST00000592885 SPO11Q9Y5K1 396 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 HEMK1Q9Y5R4 338 aaPredicted RBP13.08□□□□□ -0.32
APOC1-209ENST00000592885 hCG_1818297A0A087WSY0 165 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 ZNF891A8MT65 544 aaPredicted RBP13.07□□□□□ -0.32
APOC1-209ENST00000592885 PDZK1P1A8MUH7 402 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 SLC28A2O43868 658 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 UBXN7O94888 489 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 TNNT1P13805 278 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 LIFP15018 202 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
APOC1-209ENST00000592885 NFKB1P19838 968 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 IDSP22304 550 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 CD68P34810 354 aaPredicted RBP13.07□□□□□ -0.32
APOC1-209ENST00000592885 SPAM1P38567 509 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 MAPK9P45984 424 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 WNT3AP56704 352 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 ABHD18Q0P651 414 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 MPP3Q13368 585 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 PPP2R5EQ16537 467 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 SNAP47Q5SQN1 464 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 ZNF648Q5T619 568 aaPredicted RBP13.07□□□□□ -0.32
APOC1-209ENST00000592885 CYB5D1Q6P9G0 228 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 BORAQ6PGQ7 559 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 SARM1Q6SZW1 724 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 ZNF547Q8IVP9 402 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 CCDC170Q8IYT3 715 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 SLC45A3Q96JT2 553 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 CALR3Q96L12 384 aaKnown RBP13.07□□□□□ -0.32
APOC1-209ENST00000592885 C9orf72Q96LT7 481 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 TBC1D10AQ9BXI6 508 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 ARFGAP3Q9NP61 516 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 GEMIN8Q9NWZ8 242 aaKnown RBP13.07□□□□□ -0.32
APOC1-209ENST00000592885 SIDT1Q9NXL6 827 aaKnown RBP13.07□□□□□ -0.32
APOC1-209ENST00000592885 KLHL8Q9P2G9 620 aaPredicted RBP13.07□□□□□ -0.32
APOC1-209ENST00000592885 TUBD1Q9UJT1 453 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 TRHDEQ9UKU6 1024 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 HYOU1Q9Y4L1 999 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 ALG6Q9Y672 507 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 PIEZO2Q9H5I5 2752 aa13.07□□□□□ -0.32
APOC1-209ENST00000592885 A8MU76 341 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 POLR1CO15160 346 aaPredicted RBP13.06□□□□□ -0.32
APOC1-209ENST00000592885 ZNF189O75820 626 aaPredicted RBP13.06□□□□□ -0.32
APOC1-209ENST00000592885 STK17BO94768 372 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 ZRANB2O95218 330 aaKnown RBP eCLIP13.06□□□□□ -0.32
APOC1-209ENST00000592885 DLGAP3O95886 979 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 ITGB6P18564 788 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 SLC19A1P41440 591 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 HALP42357 657 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 MAGEA1P43355 309 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 CAPZBP47756 277 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 DMPKQ09013 629 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 NFATC3Q12968 1075 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 XRCC4Q13426 336 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 ITGA9Q13797 1035 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 PLA2G4EQ3MJ16 856 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 ATP13A5Q4VNC0 1218 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 CRTC2Q53ET0 693 aaPredicted RBP13.06□□□□□ -0.32
APOC1-209ENST00000592885 SIRPB2Q5JXA9 342 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 LDLRAP1Q5SW96 308 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 BBS12Q6ZW61 710 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 GLT6D1Q7Z4J2 308 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 PRSS42Q7Z5A4 293 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 C11orf96Q7Z7L8 435 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 TRAPPC5Q8IUR0 188 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 TTC30BQ8N4P2 665 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 DDHD1Q8NEL9 900 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 JPH3Q8WXH2 748 aaPredicted RBP13.06□□□□□ -0.32
APOC1-209ENST00000592885 MRGPRX2Q96LB1 330 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 TTC25Q96NG3 672 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 FERMT1Q9BQL6 677 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 RAB33BQ9H082 229 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 UBP1Q9NZI7 540 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 OGFRQ9NZT2 677 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 SCHIP1Q9P0W5 487 aaPredicted RBP13.06□□□□□ -0.32
APOC1-209ENST00000592885 SAE1Q9UBE0 346 aaPredicted RBP13.06□□□□□ -0.32
APOC1-209ENST00000592885 SLC23A2Q9UGH3 650 aa13.06□□□□□ -0.32
APOC1-209ENST00000592885 DNMT3AQ9Y6K1 912 aaPredicted RBP13.06□□□□□ -0.32
APOC1-209ENST00000592885 GLYATL1P3A0A0U1RQE8 302 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms