RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 RDH14Q9HBH5 336 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 SARS2Q9NP81 518 aaKnown RBP26.85■■□□□ 1.89
SMAD4-213ENST00000591914 KIR2DS5A0A0G2JLQ3 304 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 A0A0G2JNG1 304 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 KIR2DS3K7RE56 304 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 SNX2O60749 519 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 PRAMEF1O95521 474 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 AP2A1O95782 977 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 MLLT3P42568 568 aaPredicted RBP26.84■■□□□ 1.89
SMAD4-213ENST00000591914 ZNF140P52738 457 aaPredicted RBP26.84■■□□□ 1.89
SMAD4-213ENST00000591914 KIR2DS5Q14953 304 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 PLA2G4EQ3MJ16 856 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 MAP9Q49MG5 647 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 GPRC6AQ5T6X5 926 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 PIM3Q86V86 326 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 ZNF398Q8TD17 642 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 C1orf54Q8WWF1 131 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 TTC25Q96NG3 672 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 DCBLD2Q96PD2 775 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 PRDM8Q9NQV8 689 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 THSD1Q9NS62 852 aa26.84■■□□□ 1.89
SMAD4-213ENST00000591914 IGHV1OR21-1A0A087WYE8 117 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 OR5K4A6NMS3 321 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 PLD2O14939 933 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 PSMD3O43242 534 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 RBMS1P29558 406 aaKnown RBP26.83■■□□□ 1.89
SMAD4-213ENST00000591914 XIAPP98170 497 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 HHEXQ03014 270 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 GTF2H3Q13889 308 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 SIX1Q15475 284 aaPredicted RBP26.83■■□□□ 1.89
SMAD4-213ENST00000591914 RAB11FIP2Q7L804 512 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 RASGEF1AQ8N9B8 481 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 NUDT22Q9BRQ3 303 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 SEMA6CQ9H3T2 930 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 OSGEPL1Q9H4B0 414 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 KCNK4Q9NYG8 393 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 FKBPLQ9UIM3 349 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 ZNF148Q9UQR1 794 aa26.83■■□□□ 1.89
SMAD4-213ENST00000591914 CDRT15L2A8MXV6 281 aa26.82■■□□□ 1.88
SMAD4-213ENST00000591914 LDB2O43679 373 aa26.82■■□□□ 1.88
SMAD4-213ENST00000591914 SRP72O76094 671 aaKnown RBP26.82■■□□□ 1.88
SMAD4-213ENST00000591914 PCBP4P57723 403 aaKnown RBP26.82■■□□□ 1.88
SMAD4-213ENST00000591914 GPLD1P80108 840 aa26.82■■□□□ 1.88
SMAD4-213ENST00000591914 C19orf48Q6RUI8 117 aa26.82■■□□□ 1.88
SMAD4-213ENST00000591914 ZNF574Q6ZN55 896 aaPredicted RBP26.82■■□□□ 1.88
SMAD4-213ENST00000591914 USP53Q70EK8 1073 aa26.82■■□□□ 1.88
SMAD4-213ENST00000591914 SLC9B2Q86UD5 537 aa26.82■■□□□ 1.88
SMAD4-213ENST00000591914 TRAPPC5Q8IUR0 188 aa26.82■■□□□ 1.88
SMAD4-213ENST00000591914 OR13C4Q8NGS5 318 aa26.82■■□□□ 1.88
SMAD4-213ENST00000591914 HNRNPLLQ8WVV9 542 aaKnown RBP26.82■■□□□ 1.88
SMAD4-213ENST00000591914 ADAMTS20P59510 1910 aa26.82■■□□□ 1.88
SMAD4-213ENST00000591914 GOLGA6L3A6NEY3 463 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 AGAP14A8MT82 685 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 RRP8O43159 456 aaKnown RBP26.81■■□□□ 1.88
SMAD4-213ENST00000591914 ITGA2BP08514 1039 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 NFATC2Q13469 925 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 NKAIN2Q5VXU1 208 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 FOXR1Q6PIV2 292 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 ZNF761Q86XN6 746 aaPredicted RBP26.81■■□□□ 1.88
SMAD4-213ENST00000591914 FBXO39Q8N4B4 442 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 TAB3Q8N5C8 712 aaPredicted RBP26.81■■□□□ 1.88
SMAD4-213ENST00000591914 AVL9Q8NBF6 648 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 TMEM159Q96B96 161 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 SLC38A3Q99624 504 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 STN1Q9H668 368 aaKnown RBP26.81■■□□□ 1.88
SMAD4-213ENST00000591914 CPNE7Q9UBL6 633 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 DNAJC16Q9Y2G8 782 aa26.81■■□□□ 1.88
SMAD4-213ENST00000591914 NBEAQ8NFP9 2946 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 ERI2A8K979 691 aaKnown RBP26.8■■□□□ 1.88
SMAD4-213ENST00000591914 TNFSF15O95150 251 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 IFNB1P01574 187 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 CSF2RBP32927 897 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 HADHAP40939 763 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 CTSCP53634 463 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 UBE2IP63279 158 aaKnown RBP26.8■■□□□ 1.88
SMAD4-213ENST00000591914 CFHR1Q03591 330 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 SNX1Q13596 522 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 CCNG2Q16589 344 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 COL28A1Q2UY09 1125 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 PHF19Q5T6S3 580 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 WASH2PQ6VEQ5 465 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 CLEC14AQ86T13 490 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 ZNF248Q8NDW4 579 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 SH3KBP1Q96B97 665 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 DPYSL5Q9BPU6 564 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 ASB8Q9H765 288 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 WASH6PQ9NQA3 447 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 SCHIP1Q9P0W5 487 aaPredicted RBP26.8■■□□□ 1.88
SMAD4-213ENST00000591914 ZKSCAN5Q9Y2L8 839 aa26.8■■□□□ 1.88
SMAD4-213ENST00000591914 IGHV5-10-1A0A0J9YXX1 117 aa26.79■■□□□ 1.88
SMAD4-213ENST00000591914 KCNJ13O60928 360 aa26.79■■□□□ 1.88
SMAD4-213ENST00000591914 HOXB3P14651 431 aaPredicted RBP26.79■■□□□ 1.88
SMAD4-213ENST00000591914 TPH1P17752 444 aa26.79■■□□□ 1.88
SMAD4-213ENST00000591914 VCLP18206 1134 aa26.79■■□□□ 1.88
SMAD4-213ENST00000591914 XRCC1P18887 633 aaPredicted RBP26.79■■□□□ 1.88
SMAD4-213ENST00000591914 AGAP9Q5VTM2 703 aa26.79■■□□□ 1.88
SMAD4-213ENST00000591914 DRICH1Q6PGQ1 229 aaPredicted RBP26.79■■□□□ 1.88
SMAD4-213ENST00000591914 ABRAXAS1Q6UWZ7 409 aa26.79■■□□□ 1.88
SMAD4-213ENST00000591914 LRRC69Q6ZNQ3 347 aa26.79■■□□□ 1.88
SMAD4-213ENST00000591914 LINC00523Q86TU6 105 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms