RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 LRRN4Q8WUT4 740 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 ITPKCQ96DU7 683 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 RTP4Q96DX8 246 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 IMP4Q96G21 291 aaKnown RBP10.28□□□□□ -0.76
VPS4B-207ENST00000591519 PANX2Q96RD6 677 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 TRIB3Q96RU7 358 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 UCK1Q9HA47 277 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 ZFYVE1Q9HBF4 777 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 ATXN10Q9UBB4 475 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 NFKBIL1Q9UBC1 381 aaPredicted RBP10.28□□□□□ -0.76
VPS4B-207ENST00000591519 PRKAB1Q9Y478 270 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 TTLL3Q9Y4R7 772 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 TLN1Q9Y490 2541 aaKnown RBP10.28□□□□□ -0.76
VPS4B-207ENST00000591519 FAM181BA6NEQ2 426 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 EFCAB7A8K855 629 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 KCNK1O00180 336 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 LIFP15018 202 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF8P17098 575 aaPredicted RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 XRCC1P18887 633 aaPredicted RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 MAP4P27816 1152 aaKnown RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 CDC25BP30305 580 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 ARHGAP25P42331 645 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 NOP2P46087 812 aaKnown RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 CLCA4Q14CN2 919 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 LRRC38Q5VT99 294 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 ANKS6Q68DC2 871 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 RAD9BQ6WBX8 426 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 ATG14Q6ZNE5 492 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF761Q86XN6 746 aaPredicted RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 GPR26Q8NDV2 337 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 ACRBPQ8NEB7 543 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 JPH3Q8WXH2 748 aaPredicted RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 NCSTNQ92542 709 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 SLC45A3Q96JT2 553 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF830Q96NB3 372 aaPredicted RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 CATSPER2Q96P56 530 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 SRPK1Q96SB4 655 aaKnown RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 BRD8Q9H0E9 1235 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 SLC25A18Q9H1K4 315 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 SLC25A51Q9H1U9 297 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 STN1Q9H668 368 aaKnown RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 RAD18Q9NS91 495 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 CPNE7Q9UBL6 633 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 IL17BQ9UHF5 180 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 TUBD1Q9UJT1 453 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 KCNK6Q9Y257 313 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 HYOU1Q9Y4L1 999 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 TMEM184BQ9Y519 407 aaPredicted RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 PCDHA13Q9Y5I0 950 aa10.27□□□□□ -0.77
VPS4B-207ENST00000591519 HEMK1Q9Y5R4 338 aaPredicted RBP10.27□□□□□ -0.77
VPS4B-207ENST00000591519 SPTA1P02549 2419 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 LILRA5A6NI73 299 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 PRR19A6NJB7 356 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 GOLGA6L6A8MZA4 724 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 RAD1O60671 282 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 PPFIA2O75334 1257 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 MTA2O94776 668 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 SLC25A14O95258 325 aaPredicted RBP10.26□□□□□ -0.77
VPS4B-207ENST00000591519 C9P02748 559 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 ANKRD34CP0C6C1 535 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 ACP5P13686 325 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 ZFXP17010 805 aaPredicted RBP10.26□□□□□ -0.77
VPS4B-207ENST00000591519 UBE2IP63279 158 aaKnown RBP10.26□□□□□ -0.77
VPS4B-207ENST00000591519 CDK18Q07002 472 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 ABHD18Q0P651 414 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 ZBTB17Q13105 803 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 NFATC2Q13469 925 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 PDK1Q15118 436 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 TCEAL1Q15170 157 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 CRTC2Q53ET0 693 aaPredicted RBP10.26□□□□□ -0.77
VPS4B-207ENST00000591519 BORAQ6PGQ7 559 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 ABRAXAS1Q6UWZ7 409 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 CEACAM20Q6UY09 585 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 WASH2PQ6VEQ5 465 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 TIPARPQ7Z3E1 657 aaKnown RBP10.26□□□□□ -0.77
VPS4B-207ENST00000591519 ADGRG6Q86SQ4 1221 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 NT5DC3Q86UY8 548 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 FAM129CQ86XR2 697 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 PLXDC1Q8IUK5 500 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 TMTC1Q8IUR5 882 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 CCDC170Q8IYT3 715 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 NLGN4XQ8N0W4 816 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 TRAM1L1Q8N609 369 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 NLGN4YQ8NFZ3 816 aaPredicted RBP10.26□□□□□ -0.77
VPS4B-207ENST00000591519 DTX3LQ8TDB6 740 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 GLYATL1Q969I3 302 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 OLFM3Q96PB7 478 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 PLEKHG4BQ96PX9 1271 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 BAG1Q99933 345 aaPredicted RBP10.26□□□□□ -0.77
VPS4B-207ENST00000591519 DESI2Q9BSY9 194 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 ZSCAN5AQ9BUG6 496 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 EFHD1Q9BUP0 239 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 TRIT1Q9H3H1 467 aaKnown RBP10.26□□□□□ -0.77
VPS4B-207ENST00000591519 GOLPH3Q9H4A6 298 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 WASH6PQ9NQA3 447 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 SLC23A2Q9UGH3 650 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 EPN1Q9Y6I3 576 aaPredicted RBP10.26□□□□□ -0.77
VPS4B-207ENST00000591519 BOD1L1Q8NFC6 3051 aa10.26□□□□□ -0.77
VPS4B-207ENST00000591519 LRRD1A4D1F6 860 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF891A8MT65 544 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms