RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 TEAD1P28347 426 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 NUDT1P36639 197 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 PPP2CBP62714 309 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 PPP2CAP67775 309 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 SGCGQ13326 291 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 NFATC2Q13469 925 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 STAT4Q14765 748 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 SMAD1Q15797 465 aaKnown RBP16.44■□□□□ 0.22
GCDH-213ENST00000590627 KLHL38Q2WGJ6 581 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 KBTBD12Q3ZCT8 623 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 TEDDM1Q5T9Z0 273 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 LAYNQ6UX15 382 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 KIAA0408Q6ZU52 694 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 SNX20Q7Z614 316 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 PTAR1Q7Z6K3 402 aaPredicted RBP16.44■□□□□ 0.22
GCDH-213ENST00000590627 GALNT7Q86SF2 657 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 ZNF398Q8TD17 642 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 SCAMP4Q969E2 229 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 AP2M1Q96CW1 435 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 RIOK2Q9BVS4 552 aaKnown RBP16.44■□□□□ 0.22
GCDH-213ENST00000590627 PPANQ9NQ55 473 aaKnown RBP16.44■□□□□ 0.22
GCDH-213ENST00000590627 IL1RAPL1Q9NZN1 696 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 VPS18Q9P253 973 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 CD84Q9UIB8 345 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 SLC30A1Q9Y6M5 507 aa16.44■□□□□ 0.22
GCDH-213ENST00000590627 OR51F1A6NGY5 319 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 FAM47DPA6NHR8 397 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 CD3EAPO15446 510 aaKnown RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 PYGLP06737 847 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 OGNP20774 298 aaKnown RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 ITGA9Q13797 1035 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 CASP8Q14790 479 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 LRRC14Q15048 493 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 WSCD2Q2TBF2 565 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 FASTKD1Q53R41 847 aaKnown RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 AARS2Q5JTZ9 985 aaKnown RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 ALS2CLQ60I27 953 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 MRNIPQ6NTE8 343 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 CERS6Q6ZMG9 384 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 MARK2Q7KZI7 788 aaKnown RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 SLC26A11Q86WA9 606 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 LRRC6Q86X45 466 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 CILP2Q8IUL8 1156 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 C2CD4AQ8NCU7 369 aaPredicted RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 DENND6BQ8NEG7 585 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 UHMK1Q8TAS1 419 aaKnown RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 CENPTQ96BT3 561 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 SLC6A18Q96N87 628 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 TCF12Q99081 682 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 ELF4Q99607 663 aaPredicted RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 CCDC77Q9BR77 488 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 PPCSQ9HAB8 311 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 IARS2Q9NSE4 1012 aaKnown RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 CATSPERZQ9NTU4 200 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 SMOXQ9NWM0 555 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 NSMCE4AQ9NXX6 385 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 ZFATQ9P243 1243 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 MARCH4Q9P2E8 410 aaPredicted RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 NFS1Q9Y697 457 aa16.43■□□□□ 0.22
GCDH-213ENST00000590627 ZNF106Q9H2Y7 1883 aaKnown RBP16.43■□□□□ 0.22
GCDH-213ENST00000590627 GOLGA8CPA6NN73 597 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 CXorf49A8MYA2 514 aaPredicted RBP16.42■□□□□ 0.22
GCDH-213ENST00000590627 GOLGA8KD6RF30 607 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 GOLGA8TH3BQL2 631 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 PAK4O96013 591 aaPredicted RBP16.42■□□□□ 0.22
GCDH-213ENST00000590627 SOD1P00441 154 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 SHBGP04278 402 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 EIF3BP55884 814 aaKnown RBP16.42■□□□□ 0.22
GCDH-213ENST00000590627 CAMK2BQ13554 666 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 TYSND1Q2T9J0 566 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 COL28A1Q2UY09 1125 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 SETMARQ53H47 684 aaPredicted RBP16.42■□□□□ 0.22
GCDH-213ENST00000590627 ZRANB3Q5FWF4 1079 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 LYPLAL1Q5VWZ2 237 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 ZNF470Q6ECI4 717 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 C19orf48Q6RUI8 117 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 HDXQ7Z353 690 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 SDCCAG8Q86SQ7 713 aaPredicted RBP16.42■□□□□ 0.22
GCDH-213ENST00000590627 PIANPQ8IYJ0 282 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 TP53I13Q8NBR0 393 aaPredicted RBP16.42■□□□□ 0.22
GCDH-213ENST00000590627 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.42■□□□□ 0.22
GCDH-213ENST00000590627 ULK4Q96C45 1275 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 VPS35Q96QK1 796 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 AGAP2Q99490 1192 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 KLF6Q99612 283 aaPredicted RBP16.42■□□□□ 0.22
GCDH-213ENST00000590627 DHRS4Q9BTZ2 278 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 TMEM109Q9BVC6 243 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 SPATA16Q9BXB7 569 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 ASB8Q9H765 288 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 EBF2Q9HAK2 575 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 FTSJ1Q9UET6 329 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 FBXO5Q9UKT4 447 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 PLAAQ9Y263 795 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 PCDHGA1Q9Y5H4 931 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 KNTC1P50748 2209 aa16.42■□□□□ 0.22
GCDH-213ENST00000590627 URB1O60287 2271 aaKnown RBP16.42■□□□□ 0.22
GCDH-213ENST00000590627 TRPM6Q9BX84 2022 aa16.41■□□□□ 0.22
GCDH-213ENST00000590627 EXOC1LA0A1B0GW35 172 aa16.41■□□□□ 0.22
GCDH-213ENST00000590627 TRABD2BA6NFA1 517 aa16.41■□□□□ 0.22
GCDH-213ENST00000590627 FADS2P1A8MWK0 482 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms