RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 GSDMCQ9BYG8 508 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 GPR63Q9BZJ6 419 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 NRSN2Q9GZP1 204 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 SUDS3Q9H7L9 328 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-211ENST00000590499 RAD18Q9NS91 495 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 SPATS2LQ9NUQ6 558 aaKnown RBP11.1□□□□□ -0.63
SMAD4-211ENST00000590499 HACD3Q9P035 362 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 IL17CQ9P0M4 197 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 TAAR2Q9P1P5 351 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 GULP1Q9UBP9 304 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 TMPRSS11EQ9UL52 423 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 PLEKHM1Q9Y4G2 1056 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 NBEAQ8NFP9 2946 aa11.1□□□□□ -0.63
SMAD4-211ENST00000590499 B4DGG1 531 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 NTN3O00634 580 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-211ENST00000590499 GAPDHSO14556 408 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-211ENST00000590499 TCEA3O75764 348 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 STK10O94804 968 aaKnown RBP11.09□□□□□ -0.63
SMAD4-211ENST00000590499 AGTP01019 485 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 OLIG2Q13516 323 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 LRP8Q14114 963 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 RTP5Q14D33 572 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 OASLQ15646 514 aaKnown RBP11.09□□□□□ -0.63
SMAD4-211ENST00000590499 C14orf28Q4W4Y0 310 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 ZNF569Q5MCW4 686 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 KCTD11Q693B1 232 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 DENND5AQ6IQ26 1287 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 MARK2Q7KZI7 788 aaKnown RBP11.09□□□□□ -0.63
SMAD4-211ENST00000590499 SLC13A5Q86YT5 568 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-211ENST00000590499 GALNT13Q8IUC8 556 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 FAM71DQ8N9W8 422 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 OR6C4Q8NGE1 309 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 GLYATL1Q969I3 302 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 NXPE2Q96DL1 559 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 RTP4Q96DX8 246 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 VPS35Q96QK1 796 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 CCDC3Q9BQI4 270 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 FICDQ9BVA6 458 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 SPATA16Q9BXB7 569 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 CARD9Q9H257 536 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 CCDC86Q9H6F5 360 aaKnown RBP11.09□□□□□ -0.63
SMAD4-211ENST00000590499 RMI1Q9H9A7 625 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 BPIFA1Q9NP55 256 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 IL26Q9NPH9 171 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 LZTFL1Q9NQ48 299 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 APPL1Q9UKG1 709 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 PPP2R2CQ9Y2T4 447 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 AAR2Q9Y312 384 aaKnown RBP11.09□□□□□ -0.63
SMAD4-211ENST00000590499 PCDHB1Q9Y5F3 818 aa11.09□□□□□ -0.63
SMAD4-211ENST00000590499 A0A1W2PQM1 296 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 SRRM3A6NNA2 597 aaPredicted RBP11.08□□□□□ -0.64
SMAD4-211ENST00000590499 GPR89AB7ZAQ6 455 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 CHUKO15111 745 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 NUDT21O43809 227 aaKnown RBP11.08□□□□□ -0.64
SMAD4-211ENST00000590499 NUAK1O60285 661 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 CSO75390 466 aaKnown RBP11.08□□□□□ -0.64
SMAD4-211ENST00000590499 GPR89BP0CG08 455 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 PNLIPP16233 465 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 GLB1P16278 677 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ACTR1BP42025 376 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ACTR1AP61163 376 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 CYP4F3Q08477 520 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 RPS6KA1Q15418 735 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 SIX1Q15475 284 aaPredicted RBP11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ISXQ2M1V0 245 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 KHDC1Q4VXA5 237 aaKnown RBP11.08□□□□□ -0.64
SMAD4-211ENST00000590499 SEL1L2Q5TEA6 688 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 FIGNL1Q6PIW4 674 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 SLC30A9Q6PML9 568 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 GLT6D1Q7Z4J2 308 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ZNF438Q7Z4V0 828 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ADGRG6Q86SQ4 1221 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 CD163Q86VB7 1156 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 NAGSQ8N159 534 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 WDR48Q8TAF3 677 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 BLOC1S5Q8TDH9 187 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ZDHHC1Q8WTX9 485 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 EDARADDQ8WWZ3 215 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ATG4AQ8WYN0 398 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 PPP1R2P1Q96PQ5 205 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 DEPDC7Q96QD5 511 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 TMEM121Q9BTD3 319 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 TLR10Q9BXR5 811 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 FRMD8P1Q9BZ68 369 aaPredicted RBP11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ZCCHC2Q9C0B9 1178 aaKnown RBP11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ABCG4Q9H172 646 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 DPEP2Q9H4A9 486 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ARNT2Q9HBZ2 717 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 TRIM39Q9HCM9 518 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ZNF358Q9NW07 568 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 ATXN10Q9UBB4 475 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 RNF215Q9Y6U7 377 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 FAM208BQ5VWN6 2430 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 LOC400499M0QZD8 3231 aa11.08□□□□□ -0.64
SMAD4-211ENST00000590499 AHCTF1Q8WYP5 2266 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 PTPRQQ9UMZ3 2332 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 A0A1W2PNU3 283 aaPredicted RBP11.07□□□□□ -0.64
SMAD4-211ENST00000590499 A6NCN8 305 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 PRR19A6NJB7 356 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms