RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 F5H423 210 aaPredicted RBP16.38■□□□□ 0.21
NFIC-208ENST00000589537 CRTAMO95727 393 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 EML2O95834 649 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 THRAP10827 490 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 HGFP14210 728 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 PSMB4P28070 264 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 PPM1FP49593 454 aaPredicted RBP16.38■□□□□ 0.21
NFIC-208ENST00000589537 CXADRP78310 365 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 TMEM115Q12893 351 aaPredicted RBP16.38■□□□□ 0.21
NFIC-208ENST00000589537 TAF1AQ15573 450 aaPredicted RBP16.38■□□□□ 0.21
NFIC-208ENST00000589537 WDR74Q6RFH5 385 aaPredicted RBP16.38■□□□□ 0.21
NFIC-208ENST00000589537 CRTC3Q6UUV7 619 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 WASH2PQ6VEQ5 465 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 TMPRSS9Q7Z410 1059 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 RBM12BQ8IXT5 1001 aaKnown RBP16.38■□□□□ 0.21
NFIC-208ENST00000589537 LSM14AQ8ND56 463 aaKnown RBP16.38■□□□□ 0.21
NFIC-208ENST00000589537 AGBL5Q8NDL9 886 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 DDHD1Q8NEL9 900 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 CRELD1Q96HD1 420 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 ZNF514Q96K75 400 aaPredicted RBP16.38■□□□□ 0.21
NFIC-208ENST00000589537 CCDC74BQ96LY2 380 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 ARFGAP3Q9NP61 516 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 WASH6PQ9NQA3 447 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 PDP2Q9P2J9 529 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 CPNE7Q9UBL6 633 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 SCN8AQ9UQD0 1980 aa16.38■□□□□ 0.21
NFIC-208ENST00000589537 KLHL33A6NCF5 533 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 KRT86O43790 486 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 FTCDO95954 541 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 AGTP01019 485 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 LIPCP11150 499 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 XRCC1P18887 633 aaPredicted RBP16.37■□□□□ 0.21
NFIC-208ENST00000589537 LPOP22079 712 aaPredicted RBP16.37■□□□□ 0.21
NFIC-208ENST00000589537 IDSP22304 550 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 CSTF2P33240 577 aaKnown RBP eCLIP16.37■□□□□ 0.21
NFIC-208ENST00000589537 ADRA1AP35348 466 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 CLN3Q13286 438 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 C16orf72Q14CZ0 275 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 ZNF648Q5T619 568 aaPredicted RBP16.37■□□□□ 0.21
NFIC-208ENST00000589537 AGAP9Q5VTM2 703 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 NKAIN2Q5VXU1 208 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 ABRAXAS1Q6UWZ7 409 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 FAM151BQ6UXP7 276 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 ZNF574Q6ZN55 896 aaPredicted RBP16.37■□□□□ 0.21
NFIC-208ENST00000589537 ARHGEF18Q6ZSZ5 1173 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 TRAPPC5Q8IUR0 188 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 KLHDC8BQ8IXV7 354 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 SNRNP27Q8WVK2 155 aaKnown RBP16.37■□□□□ 0.21
NFIC-208ENST00000589537 HES6Q96HZ4 224 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 GORASP1Q9BQQ3 440 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 FRMD8P1Q9BZ68 369 aaPredicted RBP16.37■□□□□ 0.21
NFIC-208ENST00000589537 C10orf88Q9H8K7 445 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 POT1Q9NUX5 634 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 TRIM10Q9UDY6 481 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 DNMT3AQ9Y6K1 912 aaPredicted RBP16.37■□□□□ 0.21
NFIC-208ENST00000589537 CACNA1GO43497 2377 aa16.37■□□□□ 0.21
NFIC-208ENST00000589537 IGSF10Q6WRI0 2623 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 UNC13CQ8NB66 2214 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 TRBV23OR9-2A0A075B6M9 112 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 PRR19A6NJB7 356 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 EIF4E1BA6NMX2 242 aaKnown RBP16.36■□□□□ 0.21
NFIC-208ENST00000589537 PDZK1P1A8MUH7 402 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 TK2O00142 265 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 DDX3YO15523 660 aaKnown RBP16.36■□□□□ 0.21
NFIC-208ENST00000589537 MTX2O75431 263 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 PRAMEF1O95521 474 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 VIPP01282 170 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 ITIH1P19827 911 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 CSF2RBP32927 897 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 MAPK10P53779 464 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 UBE2IP63279 158 aaKnown RBP16.36■□□□□ 0.21
NFIC-208ENST00000589537 RHDQ02161 417 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 VAC14Q08AM6 782 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 KLF1Q13351 362 aaPredicted RBP16.36■□□□□ 0.21
NFIC-208ENST00000589537 NFATC2Q13469 925 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 CHRNA6Q15825 494 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 PARP6Q2NL67 630 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 P3H1Q32P28 736 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 SOWAHCQ53LP3 525 aaPredicted RBP16.36■□□□□ 0.21
NFIC-208ENST00000589537 AADACL2Q6P093 401 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 ZNF547Q8IVP9 402 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 TRIM48Q8IWZ4 208 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 CCDC110Q8TBZ0 833 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 ARNT2Q9HBZ2 717 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 PRDM8Q9NQV8 689 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 TMPRSS11EQ9UL52 423 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 PCDHB11Q9Y5F2 797 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 PCDHGA3Q9Y5H0 932 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 ZFC3H1O60293 1989 aaKnown RBP16.36■□□□□ 0.21
NFIC-208ENST00000589537 PTPRQQ9UMZ3 2332 aa16.36■□□□□ 0.21
NFIC-208ENST00000589537 ARHGAP6O43182 974 aa16.35■□□□□ 0.21
NFIC-208ENST00000589537 HOXB3P14651 431 aaPredicted RBP16.35■□□□□ 0.21
NFIC-208ENST00000589537 HADHAP40939 763 aa16.35■□□□□ 0.21
NFIC-208ENST00000589537 HALP42357 657 aa16.35■□□□□ 0.21
NFIC-208ENST00000589537 RAB15P59190 212 aa16.35■□□□□ 0.21
NFIC-208ENST00000589537 DMPKQ09013 629 aa16.35■□□□□ 0.21
NFIC-208ENST00000589537 LONRF2Q1L5Z9 754 aa16.35■□□□□ 0.21
NFIC-208ENST00000589537 PLA2G4EQ3MJ16 856 aa16.35■□□□□ 0.21
NFIC-208ENST00000589537 KHDC1Q4VXA5 237 aaKnown RBP16.35■□□□□ 0.21
NFIC-208ENST00000589537 SEL1L2Q5TEA6 688 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms