RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 UGT3A2Q3SY77 523 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 PREPLQ4J6C6 727 aaPredicted RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 KANK2Q63ZY3 851 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 LRRC66Q68CR7 880 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 PGM2L1Q6PCE3 622 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 FAM151BQ6UXP7 276 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 FRA10AC1Q70Z53 315 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 DEFB123Q8N688 67 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 SIDT2Q8NBJ9 832 aaKnown RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 OR2A12Q8NGT7 310 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 OR6K2Q8NGY2 324 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 AGR3Q8TD06 166 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 ZNF483Q8TF39 744 aaPredicted RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 TSPEARQ8WU66 669 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 EEF1AKMT1Q8WVE0 214 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 JADE3Q92613 823 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 PBXIP1Q96AQ6 731 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 FAM161BQ96MY7 647 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 COPS8Q99627 209 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 FAM126AQ9BYI3 521 aaPredicted RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 CIPCQ9C0C6 399 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 PRO3102Q9H379 93 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 ZDHHC6Q9H6R6 413 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 EBF2Q9HAK2 575 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 MID1IP1Q9NPA3 183 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 SMOXQ9NWM0 555 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 THG1LQ9NWX6 298 aaKnown RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 KCTD5Q9NXV2 234 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 GDE1Q9NZC3 331 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 CD274Q9NZQ7 290 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 MYLKQ15746 1914 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 MTCL1Q9Y4B5 1905 aaKnown RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 MUC3AQ02505 3323 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 PTPRSQ13332 1948 aa10.27□□□□□ -0.76
VPS25-203ENST00000589520 IGLV3-16A0A075B6K0 115 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 LOC100653049A0A140TA62 436 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 A8MUI8 341 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 PSMD11O00231 422 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 CDC7O00311 574 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 NRG2O14511 850 aaPredicted RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 NEMP1O14524 444 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 GAPDHSO14556 408 aaPredicted RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 SLC16A5O15375 505 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 CRCPO75575 148 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 KRT34O76011 436 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 SLC25A14O95258 325 aaPredicted RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 CISD3P0C7P0 127 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 UROSP10746 265 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 CHRM1P11229 460 aaPredicted RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 ADH5P11766 374 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 LBPP18428 481 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 XPAP23025 273 aaPredicted RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 EEF1DP29692 281 aaKnown RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 HOXD11P31277 338 aaPredicted RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 MAPK9P45984 424 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 CCR10P46092 362 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 SPINT3P49223 89 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 STK19P49842 368 aaPredicted RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 STX1BP61266 288 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 ART3Q13508 389 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 EIF4HQ15056 248 aaKnown RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 PDGFRLQ15198 375 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 TGFBIQ15582 683 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 GSTA3Q16772 222 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 DUSP6Q16828 381 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 ZNF805Q5CZA5 627 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 GPRC6AQ5T6X5 926 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 SULT1C3Q6IMI6 304 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 RNF165Q6ZSG1 346 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 LARP4Q71RC2 724 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■■■■■ 32.5
VPS25-203ENST00000589520 SPATA19Q7Z5L4 167 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 CPNE9Q8IYJ1 553 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 NRSN1Q8IZ57 195 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 PGAM4Q8N0Y7 254 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 PHTF2Q8N3S3 785 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 FBXW8Q8N3Y1 598 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 ZBTB2Q8N680 514 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 PDPRQ8NCN5 879 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 BPIFB1Q8TDL5 484 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 FRS2Q8WU20 508 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 C19orf60Q96EN9 201 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 MAGEB10Q96LZ2 347 aaPredicted RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 ZSWIM3Q96MP5 696 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 KLHL32Q96NJ5 620 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 SMIM14Q96QK8 99 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 ZNF382Q96SR6 550 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 HGH1Q9BTY7 390 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 SLC25A23Q9BV35 468 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 MRPL1Q9BYD6 325 aaKnown RBP10.27□□□□□ -0.77
VPS25-203ENST00000589520 TRPV4Q9HBA0 871 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 RIC8BQ9NVN3 520 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 IL36AQ9UHA7 158 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 SLCO3A1Q9UIG8 710 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 OARD1Q9Y530 152 aa10.27□□□□□ -0.77
VPS25-203ENST00000589520 A0A088AWK7 358 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 NPEPPSL1A6NEC2 478 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 NPIPB15A6NHN6 443 aaPredicted RBP10.26□□□□□ -0.77
VPS25-203ENST00000589520 BBIP1A8MTZ0 92 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 UPK3BL1B0FP48 263 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms