RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 C1QTNF4Q9BXJ3 329 aa3.42□□□□□ -1.86
SMAD4-207ENST00000589076 PIGMQ9H3S5 423 aa3.42□□□□□ -1.86
SMAD4-207ENST00000589076 DENND2DQ9H6A0 471 aaPredicted RBP3.42□□□□□ -1.86
SMAD4-207ENST00000589076 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.42□□□□□ -1.86
SMAD4-207ENST00000589076 PAG1Q9NWQ8 432 aa3.42□□□□□ -1.86
SMAD4-207ENST00000589076 TRMT1Q9NXH9 659 aaKnown RBP3.42□□□□□ -1.86
SMAD4-207ENST00000589076 DNAJB4Q9UDY4 337 aa3.42□□□□□ -1.86
SMAD4-207ENST00000589076 TINAGQ9UJW2 476 aa3.42□□□□□ -1.86
SMAD4-207ENST00000589076 SNX9Q9Y5X1 595 aa3.42□□□□□ -1.86
SMAD4-207ENST00000589076 IGLV5-52A0A0A0MRZ9 124 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 A0A1W2PR77 199 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 CLEC18AA5D8T8 446 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 GLOD5A6NK44 160 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 EIF4E1BA6NMX2 242 aaKnown RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 SRRM3A6NNA2 597 aaPredicted RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 HS3ST1O14792 307 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 ADAMDEC1O15204 470 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 ADAM20O43506 726 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 EIF5BO60841 1220 aaKnown RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 GH2P01242 217 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 TPOP07202 933 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 UMODP07911 640 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 MMP9P14780 707 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 TRIM21P19474 475 aaKnown RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 UGT1A1P22309 533 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 APOBEC1P41238 236 aaKnown RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 PEX5P50542 639 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 SUOXP51687 545 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 CLCNKAP51800 687 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 EEF1A2Q05639 463 aaKnown RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 PLCB4Q15147 1175 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 MYLK3Q32MK0 819 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 ATP13A5Q4VNC0 1218 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 XKR9Q5GH70 373 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 NSUN5P2Q63ZY6 315 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 LCN10Q6JVE6 187 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 TPRG1Q6ZUI0 275 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 FJX1Q86VR8 437 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 TICAM2Q86XR7 235 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 NRROSQ86YC3 692 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 PCDH20Q8N6Y1 951 aaKnown RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 POMGNT2Q8NAT1 580 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 CLEC18CQ8NCF0 446 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 APPL2Q8NEU8 664 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 MTBPQ96DY7 904 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 GCNAQ96QF7 691 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 APOL6Q9BWW8 343 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 TXLNGYQ9BZA5 131 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 SEBOXQ9HB31 216 aaPredicted RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 MCM9Q9NXL9 1143 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 CPSF2Q9P2I0 782 aaKnown RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 PADI1Q9ULC6 663 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 PLAGL1Q9UM63 463 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 LOXL2Q9Y4K0 774 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 MAGED1Q9Y5V3 778 aaPredicted RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 NFS1Q9Y697 457 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 RPS6KL1Q9Y6S9 549 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 FAM169AQ9Y6X4 670 aa3.41□□□□□ -1.86
SMAD4-207ENST00000589076 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.41□□□□□ -1.86
SMAD4-207ENST00000589076 LNP1A1A4G5 178 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 LINC01553A4QN01 128 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 TMEM8BA6NDV4 472 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 FAM90A26D6RGX4 464 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 RFPL2O75678 378 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 ZBTB11O95625 1053 aaPredicted RBP3.4□□□□□ -1.87
SMAD4-207ENST00000589076 DNTTP04053 509 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 PDE1BQ01064 536 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 CXCL9Q07325 125 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 KIF5AQ12840 1032 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 TRAF3Q13114 568 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 GRAPQ13588 217 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 DHX34Q14147 1143 aaKnown RBP3.4□□□□□ -1.87
SMAD4-207ENST00000589076 OASLQ15646 514 aaKnown RBP3.4□□□□□ -1.87
SMAD4-207ENST00000589076 DLG2Q15700 870 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 CALCRLQ16602 461 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 KIF19Q2TAC6 998 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 KRT71Q3SY84 523 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 IGSF11Q5DX21 431 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 KCNT1Q5JUK3 1230 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 C18orf63Q68DL7 685 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 RGMBQ6NW40 437 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 SLC30A6Q6NXT4 461 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 WDR73Q6P4I2 378 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 PAPD4Q6PIY7 484 aaKnown RBP3.4□□□□□ -1.87
SMAD4-207ENST00000589076 BRAT1Q6PJG6 821 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 CCDC190Q86UF4 302 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 LINC00346Q8IVM7 164 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 PGBD5Q8N414 524 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 MINDY1Q8N5J2 469 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 GCSAMQ8N6F7 178 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 EMC1Q8N766 993 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 GSDMBQ8TAX9 411 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 THAP6Q8TBB0 222 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 PTPMT1Q8WUK0 201 aaPredicted RBP3.4□□□□□ -1.87
SMAD4-207ENST00000589076 RHBDF1Q96CC6 855 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 TMCO6Q96DC7 493 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 IGSF21Q96ID5 467 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 CEP295NLQ96MC4 621 aa3.4□□□□□ -1.87
SMAD4-207ENST00000589076 OR1F2PQ96R84 312 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms