RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 TBC1D3Q8IZP1 549 aaPredicted RBP22.03■■□□□ 1.12
ATG4D-209ENST00000588857 CCDC63Q8NA47 563 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 KCTD4Q8WVF5 259 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 GLYATL1Q969I3 302 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 KCNH6Q9H252 994 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D17Q9HA65 648 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 RUVBL2Q9Y230 463 aaKnown RBP22.03■■□□□ 1.12
ATG4D-209ENST00000588857 KLHL2O95198 593 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 SLC25A14O95258 325 aaPredicted RBP22.02■■□□□ 1.12
ATG4D-209ENST00000588857 CCDC166P0CW27 439 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 MSH3P20585 1137 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 TPMTP51580 245 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 KPNA2P52292 529 aaKnown RBP22.02■■□□□ 1.12
ATG4D-209ENST00000588857 TIAL1Q01085 375 aaKnown RBP eCLIP22.02■■□□□ 1.12
ATG4D-209ENST00000588857 FAM83EQ2M2I3 478 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 TSNAXIP1Q2TAA8 658 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 CCDC153Q494R4 210 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 SEL1L3Q68CR1 1132 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 CWF19L1Q69YN2 538 aaKnown RBP22.02■■□□□ 1.12
ATG4D-209ENST00000588857 C16orf46Q6P387 395 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 MACC1Q6ZN28 852 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 DDHD1Q8NEL9 900 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 ARMC2Q8NEN0 867 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 CCDC97Q96F63 343 aaPredicted RBP22.02■■□□□ 1.12
ATG4D-209ENST00000588857 GPR21Q99679 349 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 KDM4CQ9H3R0 1056 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 SYTL2Q9HCH5 934 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 ZNF358Q9NW07 568 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 TMEM216Q9P0N5 145 aa22.02■■□□□ 1.12
ATG4D-209ENST00000588857 TRMT6Q9UJA5 497 aaKnown RBP22.02■■□□□ 1.12
ATG4D-209ENST00000588857 INPP4BO15327 924 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 RNGTTO60942 597 aaKnown RBP22.01■■□□□ 1.11
ATG4D-209ENST00000588857 LTA4HP09960 611 aaKnown RBP22.01■■□□□ 1.11
ATG4D-209ENST00000588857 ETV4P43268 484 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 AGERQ15109 404 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 AGAP9Q5VTM2 703 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 NEK5Q6P3R8 708 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 PHYKPLQ8IUZ5 450 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 CENPLQ8N0S6 344 aaPredicted RBP22.01■■□□□ 1.11
ATG4D-209ENST00000588857 OSBPL6Q9BZF3 934 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 NMRAL1Q9HBL8 299 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 SARS2Q9NP81 518 aaKnown RBP22.01■■□□□ 1.11
ATG4D-209ENST00000588857 MED16Q9Y2X0 877 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 OAS3Q9Y6K5 1087 aaKnown RBP22.01■■□□□ 1.11
ATG4D-209ENST00000588857 PRSS21Q9Y6M0 314 aa22.01■■□□□ 1.11
ATG4D-209ENST00000588857 A0A1W2PQU0 124 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 K7ESM1 405 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 APOA4P06727 396 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 OR56A5P0C7T3 313 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 ATP1B2P14415 290 aaPredicted RBP22■■□□□ 1.11
ATG4D-209ENST00000588857 B4GALNT1Q00973 533 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 CSHL1Q14406 222 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 KLC3Q6P597 504 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 HORMAD1Q86X24 394 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 TMEM105Q8N8V8 129 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 TSTD1Q8NFU3 115 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 NXNL1Q96CM4 212 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 SCYL1Q96KG9 808 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 UBXN10Q96LJ8 280 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 C1QTNF7Q9BXJ2 289 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 C1QTNF2Q9BXJ5 285 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 ITM2CQ9NQX7 267 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 EMCNQ9ULC0 261 aa22■■□□□ 1.11
ATG4D-209ENST00000588857 ZFR2Q9UPR6 939 aaKnown RBP22■■□□□ 1.11
ATG4D-209ENST00000588857 IQCF5A8MTL0 148 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 F8W8V4 182 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 PLIN3O60664 434 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 MTX2O75431 263 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 TRIM16O95361 564 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 WISP3O95389 354 aaPredicted RBP21.99■■□□□ 1.11
ATG4D-209ENST00000588857 SOD1P00441 154 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 DHRS4L1P0CG22 281 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 ZNF37AP17032 561 aaPredicted RBP21.99■■□□□ 1.11
ATG4D-209ENST00000588857 AOC1P19801 751 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 IRX4P78413 519 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 GAS6Q14393 721 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 ANO7Q6IWH7 933 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 PAQR3Q6TCH7 311 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 SPATA6LQ8N4H0 392 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 SIDT2Q8NBJ9 832 aaKnown RBP21.99■■□□□ 1.11
ATG4D-209ENST00000588857 NAT14Q8WUY8 206 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 PANX3Q96QZ0 392 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 BTBD1Q9H0C5 482 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 PI15O43692 258 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 PROCP04070 461 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 LSP1P33241 339 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 GLRBP48167 497 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 SERPINB4P48594 390 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 DLG1Q12959 904 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 WSCD2Q2TBF2 565 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 MAP7D1Q3KQU3 841 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 TMEM259Q4ZIN3 620 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 PNCKQ6P2M8 343 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 TMEM207Q6UWW9 146 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 DET1Q7L5Y6 550 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 PELI3Q8N2H9 469 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 PJA1Q8NG27 643 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 ANKRD49Q8WVL7 239 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 CKAP2Q8WWK9 683 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 PRRX2Q99811 253 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms