RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ALKBH8Q96BT7 664 aaKnown RBP11.18□□□□□ -0.62
VMP1-207ENST00000588131 TSPAN17Q96FV3 270 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 TOE1Q96GM8 510 aaKnown RBP11.18□□□□□ -0.62
VMP1-207ENST00000588131 LENG8Q96PV6 779 aaPredicted RBP11.18□□□□□ -0.62
VMP1-207ENST00000588131 GPR21Q99679 349 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 SLC30A3Q99726 388 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 MYOCQ99972 504 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 C1QTNF1Q9BXJ1 281 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 CLPBQ9H078 707 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 CCDC68Q9H2F9 335 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 C6orf106Q9H6K1 298 aaPredicted RBP11.18□□□□□ -0.62
VMP1-207ENST00000588131 ZNF358Q9NW07 568 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 MKS1Q9NXB0 559 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 KCTD5Q9NXV2 234 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 WSB2Q9NYS7 404 aaPredicted RBP11.18□□□□□ -0.62
VMP1-207ENST00000588131 GNPTGQ9UJJ9 305 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
VMP1-207ENST00000588131 DOCK9Q9BZ29 2069 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 IGHV1OR15-9A0A0B4J2B8 117 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 LRRC72A6NJI9 287 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 SLC31A1O15431 190 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 SGTAO43765 313 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 SLC25A14O95258 325 aaPredicted RBP11.17□□□□□ -0.62
VMP1-207ENST00000588131 ATP1B2P14415 290 aaPredicted RBP11.17□□□□□ -0.62
VMP1-207ENST00000588131 MSH3P20585 1137 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 CRABP2P29373 138 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 CD6P30203 668 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 CRHR1P34998 444 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 CXCL12P48061 93 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 DMWDQ09019 674 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 ILF2Q12905 390 aaKnown RBP11.17□□□□□ -0.62
VMP1-207ENST00000588131 DLG1Q12959 904 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 INPP5AQ14642 412 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 TAF1BQ53T94 588 aaPredicted RBP11.17□□□□□ -0.62
VMP1-207ENST00000588131 LDLRAP1Q5SW96 308 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 PTRHD1Q6GMV3 140 aaKnown RBP11.17□□□□□ -0.62
VMP1-207ENST00000588131 C16orf46Q6P387 395 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 MACC1Q6ZN28 852 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 HEATR4Q86WZ0 1026 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 CENPLQ8N0S6 344 aaPredicted RBP11.17□□□□□ -0.62
VMP1-207ENST00000588131 RASGEF1AQ8N9B8 481 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 SIDT2Q8NBJ9 832 aaKnown RBP11.17□□□□□ -0.62
VMP1-207ENST00000588131 MGARPQ8TDB4 240 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 TCP10LQ8TDR4 215 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 DENND1AQ8TEH3 1009 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 KCTD4Q8WVF5 259 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 ANKRD49Q8WVL7 239 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 ASB12Q8WXK4 309 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 KCNJ9Q92806 393 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 DCUN1D1Q96GG9 259 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 COX14Q96I36 57 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 CABS1Q96KC9 395 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 IER2Q9BTL4 223 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 EBF2Q9HAK2 575 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 GPAMQ9HCL2 828 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 MLXIPLQ9NP71 852 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.17□□□□□ -0.62
VMP1-207ENST00000588131 SLC17A7Q9P2U7 560 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 TLK1Q9UKI8 766 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 EMCNQ9ULC0 261 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 SMG5Q9UPR3 1016 aaKnown RBP11.17□□□□□ -0.62
VMP1-207ENST00000588131 INVSQ9Y283 1065 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 COMMD10Q9Y6G5 202 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 TRPM6Q9BX84 2022 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 BPTFQ12830 3046 aa11.17□□□□□ -0.62
VMP1-207ENST00000588131 A0A087X1B8 175 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 GLRA3O75311 464 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 ZNF217O75362 1048 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 VPS26AO75436 327 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 IGHV4-34P06331 123 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 PYGLP06737 847 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CHN1P15882 459 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 AOC1P19801 751 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CHRM3P20309 590 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CD9P21926 228 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 TEAD1P28347 426 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 OXTRP30559 389 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 MAGEA9P43362 315 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CCR3P51677 355 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CLCN7P51798 805 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CTSCP53634 463 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CLDN2P57739 230 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CDK3Q00526 305 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 TMEM115Q12893 351 aaPredicted RBP11.16□□□□□ -0.62
VMP1-207ENST00000588131 PDAP1Q13442 181 aaKnown RBP11.16□□□□□ -0.62
VMP1-207ENST00000588131 KIAA0895LQ68EN5 471 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 PAQR3Q6TCH7 311 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 ADGRG6Q86SQ4 1221 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 SPATA6LQ8N4H0 392 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 CAMKK1Q8N5S9 505 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 ARFGAP2Q8N6H7 521 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 BEND7Q8N7W2 519 aaPredicted RBP11.16□□□□□ -0.62
VMP1-207ENST00000588131 CD200R1Q8TD46 325 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 NXNL1Q96CM4 212 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 SGF29Q96ES7 293 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 HIC2Q96JB3 615 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 FAM111AQ96PZ2 611 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 LGR4Q9BXB1 951 aa11.16□□□□□ -0.62
VMP1-207ENST00000588131 GPR174Q9BXC1 333 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms