RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 ZNF7P17097 686 aaPredicted RBP18.5■□□□□ 0.55
TRIM47-205ENST00000587774 GFERP55789 205 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 NFATC3Q12968 1075 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 TBR1Q16650 682 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 ATP13A5Q4VNC0 1218 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 TFDP3Q5H9I0 405 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 ZC3H18Q86VM9 953 aaKnown RBP18.5■□□□□ 0.55
TRIM47-205ENST00000587774 CACNA2D3Q8IZS8 1091 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 HAUS1Q96CS2 278 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 TEFMQ96QE5 360 aaKnown RBP18.5■□□□□ 0.55
TRIM47-205ENST00000587774 SRPK1Q96SB4 655 aaKnown RBP18.5■□□□□ 0.55
TRIM47-205ENST00000587774 TIMM29Q9BSF4 260 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 SLC12A9Q9BXP2 914 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 EPB41L1Q9H4G0 881 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 APMAPQ9HDC9 416 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 OGFRQ9NZT2 677 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 KLHL8Q9P2G9 620 aaPredicted RBP18.5■□□□□ 0.55
TRIM47-205ENST00000587774 ZNF624Q9P2J8 865 aaPredicted RBP18.5■□□□□ 0.55
TRIM47-205ENST00000587774 FAM153AQ9UHL3 310 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 PILRAQ9UKJ1 303 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 TFR2Q9UP52 801 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 ALG6Q9Y672 507 aa18.5■□□□□ 0.55
TRIM47-205ENST00000587774 COL12A1Q99715 3063 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 hCG_1818297A0A087WSY0 165 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 LOC285095A0A1B0GVY8 99 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 PDZK1P1A8MUH7 402 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 PYCARD-AS1I3L0S3 204 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 VEGFDO43915 354 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 XRCC1P18887 633 aaPredicted RBP18.49■□□□□ 0.55
TRIM47-205ENST00000587774 HMGCLP35914 325 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 CHRNA4P43681 627 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 WNT3AP56704 352 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 MC2RQ01718 297 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 SIRPB2Q5JXA9 342 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 KATNAL2Q8IYT4 538 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 ZNF567Q8N184 647 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 TTC30BQ8N4P2 665 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 TC2NQ8N9U0 490 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 P3H4Q92791 437 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 OXNAD1Q96HP4 312 aaPredicted RBP18.49■□□□□ 0.55
TRIM47-205ENST00000587774 MRGPRX2Q96LB1 330 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 SPTBP11277 2137 aa18.49■□□□□ 0.55
TRIM47-205ENST00000587774 FLNCQ14315 2725 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 GPR39O43194 453 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 MTSS1O43312 755 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 SLC28A2O43868 658 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 CDK14O94921 469 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 VIPP01282 170 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 BRAFP15056 766 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 RPL10P27635 214 aaKnown RBP18.48■□□□□ 0.55
TRIM47-205ENST00000587774 SLC19A1P41440 591 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 MAGEA1P43355 309 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 XKR5Q6UX68 686 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 CEACAM20Q6UY09 585 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 TMEM26Q6ZUK4 368 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 PRICKLE2Q7Z3G6 844 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 C11orf96Q7Z7L8 435 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 PLXDC1Q8IUK5 500 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 TRAPPC5Q8IUR0 188 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 CCDC50Q8IVM0 306 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 TRIM48Q8IWZ4 208 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 SLC25A41Q8N5S1 370 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 QKIQ96PU8 341 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRIM47-205ENST00000587774 UCK1Q9HA47 277 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 FBXO8Q9NRD0 319 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 SIDT1Q9NXL6 827 aaKnown RBP18.48■□□□□ 0.55
TRIM47-205ENST00000587774 SLC30A1Q9Y6M5 507 aa18.48■□□□□ 0.55
TRIM47-205ENST00000587774 OR52A4PA6NMU1 304 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 LCA5LO95447 670 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 C9P02748 559 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 ANKRD34CP0C6C1 535 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 TYRP1P17643 537 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 ITGB6P18564 788 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 DRG2P55039 364 aaKnown RBP18.47■□□□□ 0.55
TRIM47-205ENST00000587774 CLCA4Q14CN2 919 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 C11orf63Q6NUN7 778 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 IPMKQ8NFU5 416 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 GDAP1Q8TB36 358 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 KRT35Q92764 455 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 FCRL5Q96RD9 977 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 SPRY4Q9C004 299 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 TRABDQ9H4I3 376 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 IL26Q9NPH9 171 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 STARD5Q9NSY2 213 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 POT1Q9NUX5 634 aa18.47■□□□□ 0.55
TRIM47-205ENST00000587774 TNRC6AQ8NDV7 1962 aaKnown RBP18.47■□□□□ 0.55
TRIM47-205ENST00000587774 UBXN7O94888 489 aa18.46■□□□□ 0.55
TRIM47-205ENST00000587774 ZRANB2O95218 330 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRIM47-205ENST00000587774 EPOP01588 193 aa18.46■□□□□ 0.55
TRIM47-205ENST00000587774 SPAM1P38567 509 aa18.46■□□□□ 0.55
TRIM47-205ENST00000587774 TNNT3P45378 269 aaPredicted RBP18.46■□□□□ 0.55
TRIM47-205ENST00000587774 NFKB2Q00653 900 aa18.46■□□□□ 0.55
TRIM47-205ENST00000587774 TMEM115Q12893 351 aaPredicted RBP18.46■□□□□ 0.55
TRIM47-205ENST00000587774 SLC1A5Q15758 541 aa18.46■□□□□ 0.55
TRIM47-205ENST00000587774 SARM1Q6SZW1 724 aa18.46■□□□□ 0.55
TRIM47-205ENST00000587774 ABRAXAS1Q6UWZ7 409 aa18.46■□□□□ 0.55
TRIM47-205ENST00000587774 FAM151BQ6UXP7 276 aa18.46■□□□□ 0.55
TRIM47-205ENST00000587774 PID1Q7Z2X4 250 aa18.46■□□□□ 0.55
TRIM47-205ENST00000587774 TIPARPQ7Z3E1 657 aaKnown RBP18.46■□□□□ 0.55
TRIM47-205ENST00000587774 GLT6D1Q7Z4J2 308 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms