RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 BOCQ9BWV1 1114 aa18.07■□□□□ 0.48
H3F3B-206ENST00000587560 PHPT1Q9NRX4 125 aaPredicted RBP18.07■□□□□ 0.48
H3F3B-206ENST00000587560 NSMCE4AQ9NXX6 385 aa18.07■□□□□ 0.48
H3F3B-206ENST00000587560 SLC17A4Q9Y2C5 497 aa18.07■□□□□ 0.48
H3F3B-206ENST00000587560 CHUKO15111 745 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 VEGFDO43915 354 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 OR1I1O60431 355 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 HAUS5O94927 633 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 FUCA1P04066 466 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 CEACAM5P06731 702 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 CSE1LP55060 971 aaKnown RBP18.06■□□□□ 0.48
H3F3B-206ENST00000587560 RASA2Q15283 850 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 KLHL38Q2WGJ6 581 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 ZNF648Q5T619 568 aaPredicted RBP18.06■□□□□ 0.48
H3F3B-206ENST00000587560 RNF187Q5TA31 235 aaPredicted RBP18.06■□□□□ 0.48
H3F3B-206ENST00000587560 KCTD16Q68DU8 428 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 ZNF549Q6P9A3 640 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 CNSTQ6PJW8 725 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 Q6ZSR6 202 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 ARMCX6Q7L4S7 300 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 TRIM74Q86UV6 250 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 ZC3HC1Q86WB0 502 aaKnown RBP18.06■□□□□ 0.48
H3F3B-206ENST00000587560 RASGEF1AQ8N9B8 481 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 HEXDCQ8WVB3 486 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 CDKL2Q92772 493 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 LOXL4Q96JB6 756 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 COPS8Q99627 209 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 TMEM109Q9BVC6 243 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 ARFGAP3Q9NP61 516 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 PPANQ9NQ55 473 aaKnown RBP18.06■□□□□ 0.48
H3F3B-206ENST00000587560 FBXO6Q9NRD1 293 aaPredicted RBP18.06■□□□□ 0.48
H3F3B-206ENST00000587560 TMEM74BQ9NUR3 256 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 ATXN10Q9UBB4 475 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 PNMA8BQ9ULN7 279 aaPredicted RBP18.06■□□□□ 0.48
H3F3B-206ENST00000587560 PRSS21Q9Y6M0 314 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 PCDH15Q96QU1 1955 aa18.06■□□□□ 0.48
H3F3B-206ENST00000587560 ASH1LQ9NR48 2969 aaKnown RBP18.06■□□□□ 0.48
H3F3B-206ENST00000587560 HMX2A2RU54 273 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 TMEM202A6NGA9 273 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 TNFRSF10CO14798 259 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 VILLO15195 856 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 BCAT2O15382 392 aaPredicted RBP18.05■□□□□ 0.48
H3F3B-206ENST00000587560 DNAJC6O75061 913 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 MTX2O75431 263 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 CD38P28907 300 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 HOXD12P35452 270 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 GP5P40197 560 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 NSG1P42857 185 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 DHPSP49366 369 aaPredicted RBP18.05■□□□□ 0.48
H3F3B-206ENST00000587560 TMEM115Q12893 351 aaPredicted RBP18.05■□□□□ 0.48
H3F3B-206ENST00000587560 PDE1CQ14123 709 aaPredicted RBP18.05■□□□□ 0.48
H3F3B-206ENST00000587560 ZNF658BQ4V348 819 aaPredicted RBP18.05■□□□□ 0.48
H3F3B-206ENST00000587560 CTSL3PQ5NE16 218 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 MACC1Q6ZN28 852 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 CEP68Q76N32 757 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 TDRPQ86YL5 185 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 RBFAQ8N0V3 343 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 PPM1NQ8N819 430 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 GABPB2Q8TAK5 448 aaPredicted RBP18.05■□□□□ 0.48
H3F3B-206ENST00000587560 DCAKDQ8WVC6 231 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 RBBP8Q99708 897 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 ZNF180Q9UJW8 692 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 VPS9D1Q9Y2B5 631 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 MED16Q9Y2X0 877 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 PCYT1BQ9Y5K3 369 aaPredicted RBP18.05■□□□□ 0.48
H3F3B-206ENST00000587560 R4GN57 208 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 KNL1Q8NG31 2342 aa18.05■□□□□ 0.48
H3F3B-206ENST00000587560 MAST4O15021 2626 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 SPTY2D1-AS1A0A0U1RR47 76 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 GPR89AB7ZAQ6 455 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 PRMT5O14744 637 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-206ENST00000587560 NUAK1O60285 661 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 NDUFS3O75489 264 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 FAM155BO75949 473 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 AP2A2O94973 939 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 GPR89BP0CG08 455 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 ZNF8P17098 575 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-206ENST00000587560 PPARGP37231 505 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-206ENST00000587560 CSRP3P50461 194 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 CTSCP53634 463 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 TIAL1Q01085 375 aaKnown RBP eCLIP18.04■□□□□ 0.48
H3F3B-206ENST00000587560 BCL7AQ4VC05 210 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 ADGRD1Q6QNK2 874 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 XKR5Q6UX68 686 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 STRA8Q7Z7C7 330 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 SPATS2Q86XZ4 545 aaKnown RBP18.04■□□□□ 0.48
H3F3B-206ENST00000587560 DCP2Q8IU60 420 aaKnown RBP18.04■□□□□ 0.48
H3F3B-206ENST00000587560 SYT12Q8IV01 421 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 ZNF547Q8IVP9 402 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 KLHDC7BQ96G42 594 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 PAFAH2Q99487 392 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 RHOJQ9H4E5 214 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 PPCSQ9HAB8 311 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 ARGLU1Q9NWB6 273 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-206ENST00000587560 CORO1CQ9ULV4 474 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-206ENST00000587560 TMEM98Q9Y2Y6 226 aa18.04■□□□□ 0.48
H3F3B-206ENST00000587560 ZFC3H1O60293 1989 aaKnown RBP18.03■□□□□ 0.48
H3F3B-206ENST00000587560 A0A1B0GTW7 788 aa18.03■□□□□ 0.48
H3F3B-206ENST00000587560 EXOC1LA0A1B0GW35 172 aa18.03■□□□□ 0.48
H3F3B-206ENST00000587560 PRR19A6NJB7 356 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms