RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 KDELC2Q7Z4H8 507 aa13.86□□□□□ -0.19
HDAC5-203ENST00000586339 TRIM48Q8IWZ4 208 aa13.86□□□□□ -0.19
HDAC5-203ENST00000586339 RBM12BQ8IXT5 1001 aaKnown RBP13.86□□□□□ -0.19
HDAC5-203ENST00000586339 SPATA22Q8NHS9 363 aa13.86□□□□□ -0.19
HDAC5-203ENST00000586339 TFB1MQ8WVM0 346 aaKnown RBP13.86□□□□□ -0.19
HDAC5-203ENST00000586339 KIAA1143Q96AT1 154 aaPredicted RBP13.86□□□□□ -0.19
HDAC5-203ENST00000586339 SLC45A3Q96JT2 553 aa13.86□□□□□ -0.19
HDAC5-203ENST00000586339 VAT1Q99536 393 aa13.86□□□□□ -0.19
HDAC5-203ENST00000586339 SPRY4Q9C004 299 aa13.86□□□□□ -0.19
HDAC5-203ENST00000586339 TRIT1Q9H3H1 467 aaKnown RBP13.86□□□□□ -0.19
HDAC5-203ENST00000586339 WASH6PQ9NQA3 447 aa13.86□□□□□ -0.19
HDAC5-203ENST00000586339 GEMIN8Q9NWZ8 242 aaKnown RBP13.86□□□□□ -0.19
HDAC5-203ENST00000586339 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.86□□□□□ -0.19
HDAC5-203ENST00000586339 HACD3Q9P035 362 aa13.86□□□□□ -0.19
HDAC5-203ENST00000586339 FAM153AQ9UHL3 310 aa13.86□□□□□ -0.19
HDAC5-203ENST00000586339 TMEM184BQ9Y519 407 aaPredicted RBP13.86□□□□□ -0.19
HDAC5-203ENST00000586339 LOC285095A0A1B0GVY8 99 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 A8MU76 341 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 PMPCBO75439 489 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 CDK14O94921 469 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 ZIC2O95409 532 aaPredicted RBP13.85□□□□□ -0.19
HDAC5-203ENST00000586339 VIPP01282 170 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 VCLP18206 1134 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 ITGB6P18564 788 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 COMTP21964 271 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 MAPK9P45984 424 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 NOP2P46087 812 aaKnown RBP13.85□□□□□ -0.19
HDAC5-203ENST00000586339 CYP4F2P78329 520 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 MAP7Q14244 749 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 AGAP9Q5VTM2 703 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 BORAQ6PGQ7 559 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 ABRAXAS1Q6UWZ7 409 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 PRICKLE2Q7Z3G6 844 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 BRSK1Q8TDC3 778 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 TBC1D10AQ9BXI6 508 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 ZCCHC2Q9C0B9 1178 aaKnown RBP13.85□□□□□ -0.19
HDAC5-203ENST00000586339 SLC25A18Q9H1K4 315 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 ARFGAP3Q9NP61 516 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 SIDT1Q9NXL6 827 aaKnown RBP13.85□□□□□ -0.19
HDAC5-203ENST00000586339 TUBD1Q9UJT1 453 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 SEC16AO15027 2179 aa13.85□□□□□ -0.19
HDAC5-203ENST00000586339 HECTD1Q9ULT8 2610 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 PDZK1P1A8MUH7 402 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 AKR1B15C9JRZ8 316 aaPredicted RBP13.84□□□□□ -0.19
HDAC5-203ENST00000586339 POLR1CO15160 346 aaPredicted RBP13.84□□□□□ -0.19
HDAC5-203ENST00000586339 CST8O60676 142 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 KCNJ13O60928 360 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 UBXN7O94888 489 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 DLGAP3O95886 979 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 CD68P34810 354 aaPredicted RBP13.84□□□□□ -0.19
HDAC5-203ENST00000586339 SLC19A1P41440 591 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 ABHD18Q0P651 414 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 WASHC5Q12768 1159 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 GTF2H3Q13889 308 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 PLA2G4EQ3MJ16 856 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 ATP13A5Q4VNC0 1218 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 TFDP3Q5H9I0 405 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 ZNF648Q5T619 568 aaPredicted RBP13.84□□□□□ -0.19
HDAC5-203ENST00000586339 KDELC1Q6UW63 502 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 SPOCD1Q6ZMY3 1216 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 ZNF547Q8IVP9 402 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 P3H4Q92791 437 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 C9orf72Q96LT7 481 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 TRIM5Q9C035 493 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 RBSNQ9H1K0 784 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 CLMPQ9H6B4 373 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 GPN2Q9H9Y4 310 aaPredicted RBP13.84□□□□□ -0.19
HDAC5-203ENST00000586339 SCHIP1Q9P0W5 487 aaPredicted RBP13.84□□□□□ -0.19
HDAC5-203ENST00000586339 SLC23A2Q9UGH3 650 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 KLHL3Q9UH77 587 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 SPO11Q9Y5K1 396 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 RP1L1Q8IWN7 2480 aaPredicted RBP13.84□□□□□ -0.19
HDAC5-203ENST00000586339 FLNCQ14315 2725 aa13.84□□□□□ -0.19
HDAC5-203ENST00000586339 NAV2Q8IVL1 2488 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 HACD1B0YJ81 288 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 AURKAO14965 403 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 MTX2O75431 263 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 STK17BO94768 372 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 WISP1O95388 367 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 TNNT1P13805 278 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 PECAM1P16284 738 aaPredicted RBP13.83□□□□□ -0.2
HDAC5-203ENST00000586339 AMD1P17707 334 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 NFKB1P19838 968 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 HLA-DPA1P20036 260 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 IDSP22304 550 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 SPAM1P38567 509 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 CAPZBP47756 277 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 GFERP55789 205 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 WNT3AP56704 352 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 MC1RQ01726 317 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 MPP3Q13368 585 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 CLCA4Q14CN2 919 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 KHDC1Q4VXA5 237 aaKnown RBP13.83□□□□□ -0.2
HDAC5-203ENST00000586339 CRTC2Q53ET0 693 aaPredicted RBP13.83□□□□□ -0.2
HDAC5-203ENST00000586339 KAZNQ674X7 775 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 CYB5D1Q6P9G0 228 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 ATG14Q6ZNE5 492 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 C11orf96Q7Z7L8 435 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 TRAPPC5Q8IUR0 188 aa13.83□□□□□ -0.2
HDAC5-203ENST00000586339 KATNAL2Q8IYT4 538 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms