RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 KRT81Q14533 505 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 SEPT7Q16181 437 aaKnown RBP13.13□□□□□ -0.31
COPS3-218ENST00000584216 EIF2S3LQ2VIR3 472 aaKnown RBP13.13□□□□□ -0.31
COPS3-218ENST00000584216 CCDC122Q5T0U0 273 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 AGAP9Q5VTM2 703 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 CPZQ66K79 652 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 PWWP2BQ6NUJ5 590 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 JMJD6Q6NYC1 403 aaPredicted RBP13.13□□□□□ -0.31
COPS3-218ENST00000584216 ABRAXAS1Q6UWZ7 409 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 WASH2PQ6VEQ5 465 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 KMT5CQ86Y97 462 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 OR8K5Q8NH50 307 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 MAML1Q92585 1016 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 RSC1A1Q92681 617 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 FATE1Q969F0 183 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 ZNF653Q96CK0 615 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 SLC41A2Q96JW4 573 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 SMIM14Q96QK8 99 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 TRIM7Q9C029 511 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 SLC40A1Q9NP59 571 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 WASH6PQ9NQA3 447 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 RBM22Q9NW64 420 aaKnown RBP eCLIP13.13□□□□□ -0.31
COPS3-218ENST00000584216 SCHIP1Q9P0W5 487 aaPredicted RBP13.13□□□□□ -0.31
COPS3-218ENST00000584216 ZNF624Q9P2J8 865 aaPredicted RBP13.13□□□□□ -0.31
COPS3-218ENST00000584216 FARSAQ9Y285 508 aaKnown RBP13.13□□□□□ -0.31
COPS3-218ENST00000584216 ADGRG1Q9Y653 693 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 ICE1Q9Y2F5 2266 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 CHUKO15111 745 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 KIF1CO43896 1103 aaKnown RBP13.12□□□□□ -0.31
COPS3-218ENST00000584216 VEGFDO43915 354 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 FTLP02792 175 aaPredicted RBP13.12□□□□□ -0.31
COPS3-218ENST00000584216 IL1R2P27930 398 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 DCDC1P59894 354 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 GPR18Q14330 331 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 PIGHQ14442 188 aaPredicted RBP13.12□□□□□ -0.31
COPS3-218ENST00000584216 IFI16Q16666 785 aaKnown RBP13.12□□□□□ -0.31
COPS3-218ENST00000584216 ZNF787Q6DD87 383 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 CRTC3Q6UUV7 619 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 IRF2BP2Q7Z5L9 587 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 TICAM1Q8IUC6 712 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.12□□□□□ -0.31
COPS3-218ENST00000584216 GLYATL1Q969I3 302 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 PNPLA2Q96AD5 504 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 ZNF514Q96K75 400 aaPredicted RBP13.12□□□□□ -0.31
COPS3-218ENST00000584216 CD180Q99467 661 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 SYT11Q9BT88 431 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 ZFYVE1Q9HBF4 777 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 PCDH18Q9HCL0 1135 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 FANCLQ9NW38 375 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 SEMA5BQ9P283 1151 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 LIMA1Q9UHB6 759 aaKnown RBP13.12□□□□□ -0.31
COPS3-218ENST00000584216 DNAJC16Q9Y2G8 782 aa13.12□□□□□ -0.31
COPS3-218ENST00000584216 WIPF3A6NGB9 483 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 ANKRD66B4E2M5 251 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 CEACAM4O75871 244 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 TIAF1O95411 115 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 PRLP01236 227 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 JCHAINP01591 159 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 KLK3P07288 261 aaPredicted RBP13.11□□□□□ -0.31
COPS3-218ENST00000584216 RNF224P0DH78 156 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 RARAP10276 462 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
COPS3-218ENST00000584216 CCNCP24863 283 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 RRADP55042 308 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 GSDMDP57764 484 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 RPS18P62269 152 aaKnown RBP13.11□□□□□ -0.31
COPS3-218ENST00000584216 GALNT2Q10471 571 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 CHAF1BQ13112 559 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 MRPL49Q13405 166 aaKnown RBP13.11□□□□□ -0.31
COPS3-218ENST00000584216 PLA2G4EQ3MJ16 856 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 IZUMO3Q5VZ72 239 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 ADGRG6Q86SQ4 1221 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 TMEM126BQ8IUX1 230 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 TRAM1L1Q8N609 369 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 C5orf34Q96MH7 638 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 FGF21Q9NSA1 209 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 TMEM63CQ9P1W3 806 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 NFKBIL1Q9UBC1 381 aaPredicted RBP13.11□□□□□ -0.31
COPS3-218ENST00000584216 SLC5A6Q9Y289 635 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 CREBBPQ92793 2442 aa13.11□□□□□ -0.31
COPS3-218ENST00000584216 IGHV5-51A0A0C4DH38 117 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 OR52A4PA6NMU1 304 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 KCNJ13O60928 360 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 SCRG1O75711 98 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 TMEM63AO94886 807 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 CDK14O94921 469 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 LDLRP01130 860 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 FOLR1P15328 257 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 MX2P20592 715 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 FECHP22830 423 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 RPL10P27635 214 aaKnown RBP13.1□□□□□ -0.31
COPS3-218ENST00000584216 PTGIRP43119 386 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 TUBB4BP68371 445 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 HSD11B2P80365 405 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 IL10RAQ13651 578 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 TUBB2AQ13885 445 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 GTF2H3Q13889 308 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 QPCTQ16769 361 aa13.1□□□□□ -0.31
COPS3-218ENST00000584216 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
COPS3-218ENST00000584216 TMTC4Q5T4D3 741 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms